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The map label for this gene is comEA [H]

Identifier: 188585739

GI number: 188585739

Start: 1179541

End: 1180164

Strand: Direct

Name: comEA [H]

Synonym: Nther_1113

Alternate gene names: 188585739

Gene position: 1179541-1180164 (Clockwise)

Preceding gene: 188585738

Following gene: 188585740

Centisome position: 37.26

GC content: 36.22

Gene sequence:

>624_bases
GTGATAGCAGGTGTAGCCCTGCTTTTTGTTTATGGTTGGATTTTTGGATTGCCTGGTTCGAATAACTCTTTGGTAATTGA
TTTGGATCAAGATGAAACTATTTCTGATAAAGAAAATGATGAAGGTTTAAATCTTCAGGACAATATTAATACTGATGATC
AAATTAAAGAAAAGTCTAAAGACAGTGGAACAGAAGAATTAGTGGTGTACATATCTGGTGGGGTGAAAGAACCTGGAGTT
TACACTCTCCCCTATGGTAGTAGGGTATATCAATTAATTGAACTTGCGGGTGGGGAGCTGGAAGATTCTTTATTGGAATT
GTTAAACTTGGCTTCACCTTTGGAGGATGGTCAGCATATTCATATATACAGAGAGGGAGATGACATTGACTATGAATCAC
AACTAGTCCCTGATAACAAATCCCAAGGTGATACTAAAATAAATATCAATACAGCTGATATCACTTTACTAGAAAGCCTA
CCAGGTATAGGGCCTGTACGGGCGGAAAGTATTATTAAACATCGAGAAAAAGTAGGTGAATTTACTAGCATTGAACAAAT
AATGGATGTTAACGGTATTGGACCAGGAATATTTAACCAAATTAAAGAGCTAATAGTAACATAG

Upstream 100 bases:

>100_bases
AAAAAGGATATTTAATAGAATAAAGAGAATTATATAATTACTATATTTAGGGGGTTATGTAGTAATTAACATAAACAGGA
CAAATAGACCGTTAATAATT

Downstream 100 bases:

>100_bases
TGTTTTGTATTGCTGTTCTAATTAAGGAATAGGTATAAATCTCCCTTAGTTTAAAGTTTAGAGAAGGGGGGAGAAGCTAC
TAAATCTTTAGTAGCTATAG

Product: competence protein ComEA helix-hairpin-helix repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIAGVALLFVYGWIFGLPGSNNSLVIDLDQDETISDKENDEGLNLQDNINTDDQIKEKSKDSGTEELVVYISGGVKEPGV
YTLPYGSRVYQLIELAGGELEDSLLELLNLASPLEDGQHIHIYREGDDIDYESQLVPDNKSQGDTKININTADITLLESL
PGIGPVRAESIIKHREKVGEFTSIEQIMDVNGIGPGIFNQIKELIVT

Sequences:

>Translated_207_residues
MIAGVALLFVYGWIFGLPGSNNSLVIDLDQDETISDKENDEGLNLQDNINTDDQIKEKSKDSGTEELVVYISGGVKEPGV
YTLPYGSRVYQLIELAGGELEDSLLELLNLASPLEDGQHIHIYREGDDIDYESQLVPDNKSQGDTKININTADITLLESL
PGIGPVRAESIIKHREKVGEFTSIEQIMDVNGIGPGIFNQIKELIVT
>Mature_207_residues
MIAGVALLFVYGWIFGLPGSNNSLVIDLDQDETISDKENDEGLNLQDNINTDDQIKEKSKDSGTEELVVYISGGVKEPGV
YTLPYGSRVYQLIELAGGELEDSLLELLNLASPLEDGQHIHIYREGDDIDYESQLVPDNKSQGDTKININTADITLLESL
PGIGPVRAESIIKHREKVGEFTSIEQIMDVNGIGPGIFNQIKELIVT

Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004787
- InterPro:   IPR004509
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR019554 [H]

Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 22717; Mature: 22717

Theoretical pI: Translated: 3.93; Mature: 3.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAGVALLFVYGWIFGLPGSNNSLVIDLDQDETISDKENDEGLNLQDNINTDDQIKEKSK
CCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
DSGTEELVVYISGGVKEPGVYTLPYGSRVYQLIELAGGELEDSLLELLNLASPLEDGQHI
CCCCEEEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEE
HIYREGDDIDYESQLVPDNKSQGDTKININTADITLLESLPGIGPVRAESIIKHREKVGE
EEEECCCCCCCCCEECCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
FTSIEQIMDVNGIGPGIFNQIKELIVT
HHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIAGVALLFVYGWIFGLPGSNNSLVIDLDQDETISDKENDEGLNLQDNINTDDQIKEKSK
CCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
DSGTEELVVYISGGVKEPGVYTLPYGSRVYQLIELAGGELEDSLLELLNLASPLEDGQHI
CCCCEEEEEEEECCCCCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEE
HIYREGDDIDYESQLVPDNKSQGDTKININTADITLLESLPGIGPVRAESIIKHREKVGE
EEEECCCCCCCCCEECCCCCCCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
FTSIEQIMDVNGIGPGIFNQIKELIVT
HHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377; 7768800 [H]