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The map label for this gene is 188585734

Identifier: 188585734

GI number: 188585734

Start: 1172156

End: 1172587

Strand: Direct

Name: 188585734

Synonym: Nther_1108

Alternate gene names: NA

Gene position: 1172156-1172587 (Clockwise)

Preceding gene: 188585733

Following gene: 188585735

Centisome position: 37.03

GC content: 36.81

Gene sequence:

>432_bases
ATGGTCGAACAAAAAAATTTAACTACTGAGAATGTGTTGGGAGAAGCCAAAGGTTCTGATCTGGAAAGACCTGTAAAACA
AAATTTTCAAGGCGAAACATCTGAAACGGGTTTGTATCTTGCCATGGCTCGACAAGCTCAAAGAGAAGGCTATCCTGAAA
TTGCAGAGAGTCTTAAAAGAATTGCCATGGAGGAAGCAGAACATGCCGCAAGGTTTGCTGAATTAAATGGTATGATTAAT
GATAGTACTGAGGAAAATTTAAAAGAAATGCTTGAAGGAGAAATCTTTGCTAATCAAGATAAAAAGAAAGCGGCTGAAAA
AGCAAAAGACCAAGAATTAACTGAAACTTACACTTATTTTATTGAATCCTCCAAGGACGAAGCTAGGCACGCAAAAATGC
TTGAGGGTTTAGTTAACAAGTATTTTGGATAA

Upstream 100 bases:

>100_bases
TTGTATATCTAAACGATATCAGACAAAGTGATCAGGAGTTAGGAGAATCCCTGGCACAAATATACATGAAAGATTCATAA
AGAAAGAGGAGGACTGCATT

Downstream 100 bases:

>100_bases
ACTATTGACAACTAAGACCCAAAATATGTATTATATAAATACAATTCTATACTTTTAAATCATTGAAACATCTCGGAACG
GGAGGAGTAGGCGGTTCAGA

Product: Rubrerythrin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MVEQKNLTTENVLGEAKGSDLERPVKQNFQGETSETGLYLAMARQAQREGYPEIAESLKRIAMEEAEHAARFAELNGMIN
DSTEENLKEMLEGEIFANQDKKKAAEKAKDQELTETYTYFIESSKDEARHAKMLEGLVNKYFG

Sequences:

>Translated_143_residues
MVEQKNLTTENVLGEAKGSDLERPVKQNFQGETSETGLYLAMARQAQREGYPEIAESLKRIAMEEAEHAARFAELNGMIN
DSTEENLKEMLEGEIFANQDKKKAAEKAKDQELTETYTYFIESSKDEARHAKMLEGLVNKYFG
>Mature_143_residues
MVEQKNLTTENVLGEAKGSDLERPVKQNFQGETSETGLYLAMARQAQREGYPEIAESLKRIAMEEAEHAARFAELNGMIN
DSTEENLKEMLEGEIFANQDKKKAAEKAKDQELTETYTYFIESSKDEARHAKMLEGLVNKYFG

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 16215; Mature: 16215

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEQKNLTTENVLGEAKGSDLERPVKQNFQGETSETGLYLAMARQAQREGYPEIAESLKR
CCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
IAMEEAEHAARFAELNGMINDSTEENLKEMLEGEIFANQDKKKAAEKAKDQELTETYTYF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHH
IESSKDEARHAKMLEGLVNKYFG
HHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVEQKNLTTENVLGEAKGSDLERPVKQNFQGETSETGLYLAMARQAQREGYPEIAESLKR
CCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHH
IAMEEAEHAARFAELNGMINDSTEENLKEMLEGEIFANQDKKKAAEKAKDQELTETYTYF
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHH
IESSKDEARHAKMLEGLVNKYFG
HHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]