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The map label for this gene is 188585685

Identifier: 188585685

GI number: 188585685

Start: 1117440

End: 1118042

Strand: Direct

Name: 188585685

Synonym: Nther_1058

Alternate gene names: NA

Gene position: 1117440-1118042 (Clockwise)

Preceding gene: 188585684

Following gene: 188585686

Centisome position: 35.3

GC content: 33.33

Gene sequence:

>603_bases
TTGAAACTTGACCAGTCAAAATATGAAAATGAGGTATTTGATGATCTTGATCTGAGTTGCAGGGAGTTTAAAAATCTCAC
TTTTACGAATTGTAGTTTTGTTGATACTAACTTGGAAGAATTGAAAACTGATGGATGTATTTTTAATCAGTGTGACTTTA
CAAACGCCAGGTTCAATGAGTCGAAACATCATGAATCAGCATTTTTGAATTGTGACTTTGGGGGTACTAATTTATTCTGT
GTTTCTTTTTCTGATTGCAAAATGGTTGGGACAGATTTTACAGAAAGTAAAACAATAGCCATGTATATATTTGGAGGAGA
CTGGTCTTATACTAATTTAAGACTCAGCAATTTAAAAGGGTTAGATTTTAGTAGAACCAAACTTTCTCATGCCGATCTGT
ATGGAGCTAACTTAGAAAATGCAGTTTTTAAAGAAGCAGATTTAACAGGTGTAAATTTAGCAAAAGCCAAGCTTCAGGGC
TGTGATCTTAGAGGAGCTAAAATTGAGGATATTGACTTTAGAAACCTGGACTTAAAAAATGTTAGACTAGATTTAACTCA
AGCAGCAATAATCGTAGAGTCTTTTGGTGCTAAATTGGAATAA

Upstream 100 bases:

>100_bases
TTTAATAAAGGAAGTCAAACTATGGTCTTTTCGGTTTTGATGTGGGTGGTTATTGGAGCTGATAATTTCACTAAATTTTT
TAGGGGGGAGTGTGAGTTAG

Downstream 100 bases:

>100_bases
GAAGAAATAGCCAAAATATACAAATTATATAATCAGATTATGCCTTTGATTATTAAACTATGGGAGAATGAAAAAAATTG
GGGGATACTTTGTATGACCA

Product: pentapeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKLDQSKYENEVFDDLDLSCREFKNLTFTNCSFVDTNLEELKTDGCIFNQCDFTNARFNESKHHESAFLNCDFGGTNLFC
VSFSDCKMVGTDFTESKTIAMYIFGGDWSYTNLRLSNLKGLDFSRTKLSHADLYGANLENAVFKEADLTGVNLAKAKLQG
CDLRGAKIEDIDFRNLDLKNVRLDLTQAAIIVESFGAKLE

Sequences:

>Translated_200_residues
MKLDQSKYENEVFDDLDLSCREFKNLTFTNCSFVDTNLEELKTDGCIFNQCDFTNARFNESKHHESAFLNCDFGGTNLFC
VSFSDCKMVGTDFTESKTIAMYIFGGDWSYTNLRLSNLKGLDFSRTKLSHADLYGANLENAVFKEADLTGVNLAKAKLQG
CDLRGAKIEDIDFRNLDLKNVRLDLTQAAIIVESFGAKLE
>Mature_200_residues
MKLDQSKYENEVFDDLDLSCREFKNLTFTNCSFVDTNLEELKTDGCIFNQCDFTNARFNESKHHESAFLNCDFGGTNLFC
VSFSDCKMVGTDFTESKTIAMYIFGGDWSYTNLRLSNLKGLDFSRTKLSHADLYGANLENAVFKEADLTGVNLAKAKLQG
CDLRGAKIEDIDFRNLDLKNVRLDLTQAAIIVESFGAKLE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 22565; Mature: 22565

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDQSKYENEVFDDLDLSCREFKNLTFTNCSFVDTNLEELKTDGCIFNQCDFTNARFNE
CCCCHHHHHHHHHCCCCCCHHHHCCCEECCCEEEECCHHHHCCCCEEEECCCCCCCCCCC
SKHHESAFLNCDFGGTNLFCVSFSDCKMVGTDFTESKTIAMYIFGGDWSYTNLRLSNLKG
CCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCC
LDFSRTKLSHADLYGANLENAVFKEADLTGVNLAKAKLQGCDLRGAKIEDIDFRNLDLKN
CCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCEEHHHHHCCCCCCCCEECCCCCCCCCCCC
VRLDLTQAAIIVESFGAKLE
EEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLDQSKYENEVFDDLDLSCREFKNLTFTNCSFVDTNLEELKTDGCIFNQCDFTNARFNE
CCCCHHHHHHHHHCCCCCCHHHHCCCEECCCEEEECCHHHHCCCCEEEECCCCCCCCCCC
SKHHESAFLNCDFGGTNLFCVSFSDCKMVGTDFTESKTIAMYIFGGDWSYTNLRLSNLKG
CCCCCCEEEEECCCCCEEEEEEECCCEEECCCCCCCCEEEEEEECCCCCEEEEEECCCCC
LDFSRTKLSHADLYGANLENAVFKEADLTGVNLAKAKLQGCDLRGAKIEDIDFRNLDLKN
CCCCHHCCCCCCCCCCCCCHHHCCCCCCCCCEEHHHHHCCCCCCCCEECCCCCCCCCCCC
VRLDLTQAAIIVESFGAKLE
EEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA