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The map label for this gene is opuAC [H]

Identifier: 188585643

GI number: 188585643

Start: 1084328

End: 1085224

Strand: Direct

Name: opuAC [H]

Synonym: Nther_1016

Alternate gene names: 188585643

Gene position: 1084328-1085224 (Clockwise)

Preceding gene: 188585640

Following gene: 188585644

Centisome position: 34.25

GC content: 39.35

Gene sequence:

>897_bases
ATGTGTAAAAAGTTACTTGTTACACTAACTATTCTTTTACTAACAGCAAGTTTTGCGGTTGGTTGTGATGGGGGTTCAGA
AGAAGACGGAGATGCGTCAGTTCCTGAACGATTTGATAATGAAATTGTAGGTATAGACTCTGGTGCTGAGATTATGGGCA
CAGTAGAAAATGAAGTCATGGTGGAATACGGCCTGGATGAGTACGATCTTGTTGAATCTAGTGAAGCTGGTATGATTACT
GAAATTGATTCTAGGGTAGATGACGAGGAATGGGTAGTGGGGATCGGTTGGACACCTCACTGGAAAATCCCAGAATATGA
TATGAAATTTTTAGAAGATCCTAAAGGTATATTTGGTGAAGCGGAAAATATCAAAGCATTAAGTAGAGCAGGTTTTACTG
ATGACATGCCTGAAGTTAGTCAAACTTTACAAAATTTTTATTTGACAGAAGATCAACTTGGTGAGTTGATGGCATTAGTA
GAAGACACAGATAGTAACGAGAGGGAAGTTGTTAAAGAGTGGGCTGAAGACAATCAAGATGTAATTTCTGAATGGGTGCC
AGAAGATCCCGATGGGGAAGGCGAGACAGTAGAGCTTTTATACAATAACTGGACTGATGCTATTGCTTCCACTAATCTAA
TAGCTTATGTCTTGGAAGAGGAAATGAATTATGAAGTAGAAATGGAAATGGTGGATGTGGCTTTTGTTTTTGAAGGCTTA
GCTAGTGGAGACTACGATGCCATGGTTTGTGCCTGGTTACCATTAACTCAAGCAAATTATTGGGAAGAATACGGAGATGA
CTTGGAAGACTTGGGTCCTATCTTTGAAGGAGCAAAATTAGGGTTGGTAGTTCCCGATTATGTTGAAATAGACTCCATTG
AAGAAATGGCTGAATAA

Upstream 100 bases:

>100_bases
TGATTTTAGAGATTTGCTATTATTTCTTTTCATTGATACATTAGTAAACATATCTTTAAAACCATATAATCTAACAAAAA
CGGAAAGGAGATTCAGTTTT

Downstream 100 bases:

>100_bases
ATTTTATCAAGTTTTAGAGGTGCTATTAGGAAAATTTAATAGCCAAGTTAAGTATAATTTAGTTTTATTGTCACAGGATT
AAAAGGGAACCTCCTGTCAA

Product: Substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MCKKLLVTLTILLLTASFAVGCDGGSEEDGDASVPERFDNEIVGIDSGAEIMGTVENEVMVEYGLDEYDLVESSEAGMIT
EIDSRVDDEEWVVGIGWTPHWKIPEYDMKFLEDPKGIFGEAENIKALSRAGFTDDMPEVSQTLQNFYLTEDQLGELMALV
EDTDSNEREVVKEWAEDNQDVISEWVPEDPDGEGETVELLYNNWTDAIASTNLIAYVLEEEMNYEVEMEMVDVAFVFEGL
ASGDYDAMVCAWLPLTQANYWEEYGDDLEDLGPIFEGAKLGLVVPDYVEIDSIEEMAE

Sequences:

>Translated_298_residues
MCKKLLVTLTILLLTASFAVGCDGGSEEDGDASVPERFDNEIVGIDSGAEIMGTVENEVMVEYGLDEYDLVESSEAGMIT
EIDSRVDDEEWVVGIGWTPHWKIPEYDMKFLEDPKGIFGEAENIKALSRAGFTDDMPEVSQTLQNFYLTEDQLGELMALV
EDTDSNEREVVKEWAEDNQDVISEWVPEDPDGEGETVELLYNNWTDAIASTNLIAYVLEEEMNYEVEMEMVDVAFVFEGL
ASGDYDAMVCAWLPLTQANYWEEYGDDLEDLGPIFEGAKLGLVVPDYVEIDSIEEMAE
>Mature_298_residues
MCKKLLVTLTILLLTASFAVGCDGGSEEDGDASVPERFDNEIVGIDSGAEIMGTVENEVMVEYGLDEYDLVESSEAGMIT
EIDSRVDDEEWVVGIGWTPHWKIPEYDMKFLEDPKGIFGEAENIKALSRAGFTDDMPEVSQTLQNFYLTEDQLGELMALV
EDTDSNEREVVKEWAEDNQDVISEWVPEDPDGEGETVELLYNNWTDAIASTNLIAYVLEEEMNYEVEMEMVDVAFVFEGL
ASGDYDAMVCAWLPLTQANYWEEYGDDLEDLGPIFEGAKLGLVVPDYVEIDSIEEMAE

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33355; Mature: 33355

Theoretical pI: Translated: 3.35; Mature: 3.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKKLLVTLTILLLTASFAVGCDGGSEEDGDASVPERFDNEIVGIDSGAEIMGTVENEVM
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHCCCEEECCCCCHHEEECCCCEE
VEYGLDEYDLVESSEAGMITEIDSRVDDEEWVVGIGWTPHWKIPEYDMKFLEDPKGIFGE
EEECCCHHHHHCCCCCCCEEEHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCC
AENIKALSRAGFTDDMPEVSQTLQNFYLTEDQLGELMALVEDTDSNEREVVKEWAEDNQD
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VISEWVPEDPDGEGETVELLYNNWTDAIASTNLIAYVLEEEMNYEVEMEMVDVAFVFEGL
HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEHHHHCCCEEEHHHHHHHHHHHHH
ASGDYDAMVCAWLPLTQANYWEEYGDDLEDLGPIFEGAKLGLVVPDYVEIDSIEEMAE
CCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHCC
>Mature Secondary Structure
MCKKLLVTLTILLLTASFAVGCDGGSEEDGDASVPERFDNEIVGIDSGAEIMGTVENEVM
CCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHCCCEEECCCCCHHEEECCCCEE
VEYGLDEYDLVESSEAGMITEIDSRVDDEEWVVGIGWTPHWKIPEYDMKFLEDPKGIFGE
EEECCCHHHHHCCCCCCCEEEHHCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCCCC
AENIKALSRAGFTDDMPEVSQTLQNFYLTEDQLGELMALVEDTDSNEREVVKEWAEDNQD
HHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
VISEWVPEDPDGEGETVELLYNNWTDAIASTNLIAYVLEEEMNYEVEMEMVDVAFVFEGL
HHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHEEHHHHCCCEEEHHHHHHHHHHHHH
ASGDYDAMVCAWLPLTQANYWEEYGDDLEDLGPIFEGAKLGLVVPDYVEIDSIEEMAE
CCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]