Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
---|---|
Accession | NC_010718 |
Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is 188584756
Identifier: 188584756
GI number: 188584756
Start: 131090
End: 131998
Strand: Direct
Name: 188584756
Synonym: Nther_0114
Alternate gene names: NA
Gene position: 131090-131998 (Clockwise)
Preceding gene: 188584755
Following gene: 188584757
Centisome position: 4.14
GC content: 35.53
Gene sequence:
>909_bases ATGAAAAGAGTTGTTAGTGTTAGCCTGGGTTCGTCAAAACGCAATCATAAGGTGGAAGAAGAATTTCTGGGAGAAAAAGT TAGTATTGAAAGAATAGGTACAGATGGAGATTTAGATAAAATGAAGCAAATTATTTCAGAACTAGATGGTGAGGTAGATG CTTTTGGATTAGGAGGAATGGATTTATATCTGGCTGTAGGCAAGTATCGCTATATGTTGAAGGATGCTCAAAAAGTCGCT CAGTGTTGCAAAAATACACCAATAGTTGATGGCAGTGGTTTAAAAAATAGTTTAGAAAGAAATGCCTTACAGCAATTAAA TGAACATCATAACTTATTTAATTCCCATGATAGAGTCTTATTAGTGTCTGCTTTAGACCGTTTTGGAATGGCTGAAAAAT TGTCCCAATTACATAGTGAGGTGATATATGGGGATCTGATTTTTAGTTTGGGGATTCCAATCTCAATAAGGTCACTACAT AACCTAGAAAAAATAGCTCGATGCGCTTTGCCCGTTGTTAGATGGCTGCCGTTTAAATTACTATACCCCTCTGGAAGTAA AAAAAATCGAACTAATGGCTCGCAGAATAAATACGAAAAATATTACGACTGGGCCGATATTATCTGTGGCGATTTTCATT ATATAAATAAGTACCTTCCTGATAATTTGGAAGAAAAAGTCATAGTAACTAATACAGTTACACAGGAAGATGAAGAAAAC TTAAAAAACTGTGGACTTAAACAGTTAATAACAACTACTCCTTCCCTAAAGGGTCGATCCTTTGGAACAAATGTGATGGA AGCCCTTTTGATTGCGTTAAAAGGAGGGAAACAAGAGCTAAAACCGAGAGAGTACGAGACTTTGCTTGAAGAACTGAATT TTATTCCTTCTATTAAAGACCTTAATTGA
Upstream 100 bases:
>100_bases GTCTTAAAATCGGTGAATCGCCAATTGAAAAAGATGTATACGTCTCATCTGAAAAGTTTGCAAAGGTATTAGATGATCTT GTCTAATAGGGGGAGTTTTA
Downstream 100 bases:
>100_bases AAAATGTGCAGATTCCTAATTAGGAGGTTATCTTATGGATAAATTTGCATTCATAATCCATCCCATTTATCATAGTGATA TTATTAAAAAATTTCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Dehydrogenase-Like Protein; Dehydrogenase-Like; Dehydrogenase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MKRVVSVSLGSSKRNHKVEEEFLGEKVSIERIGTDGDLDKMKQIISELDGEVDAFGLGGMDLYLAVGKYRYMLKDAQKVA QCCKNTPIVDGSGLKNSLERNALQQLNEHHNLFNSHDRVLLVSALDRFGMAEKLSQLHSEVIYGDLIFSLGIPISIRSLH NLEKIARCALPVVRWLPFKLLYPSGSKKNRTNGSQNKYEKYYDWADIICGDFHYINKYLPDNLEEKVIVTNTVTQEDEEN LKNCGLKQLITTTPSLKGRSFGTNVMEALLIALKGGKQELKPREYETLLEELNFIPSIKDLN
Sequences:
>Translated_302_residues MKRVVSVSLGSSKRNHKVEEEFLGEKVSIERIGTDGDLDKMKQIISELDGEVDAFGLGGMDLYLAVGKYRYMLKDAQKVA QCCKNTPIVDGSGLKNSLERNALQQLNEHHNLFNSHDRVLLVSALDRFGMAEKLSQLHSEVIYGDLIFSLGIPISIRSLH NLEKIARCALPVVRWLPFKLLYPSGSKKNRTNGSQNKYEKYYDWADIICGDFHYINKYLPDNLEEKVIVTNTVTQEDEEN LKNCGLKQLITTTPSLKGRSFGTNVMEALLIALKGGKQELKPREYETLLEELNFIPSIKDLN >Mature_302_residues MKRVVSVSLGSSKRNHKVEEEFLGEKVSIERIGTDGDLDKMKQIISELDGEVDAFGLGGMDLYLAVGKYRYMLKDAQKVA QCCKNTPIVDGSGLKNSLERNALQQLNEHHNLFNSHDRVLLVSALDRFGMAEKLSQLHSEVIYGDLIFSLGIPISIRSLH NLEKIARCALPVVRWLPFKLLYPSGSKKNRTNGSQNKYEKYYDWADIICGDFHYINKYLPDNLEEKVIVTNTVTQEDEEN LKNCGLKQLITTTPSLKGRSFGTNVMEALLIALKGGKQELKPREYETLLEELNFIPSIKDLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34153; Mature: 34153
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVVSVSLGSSKRNHKVEEEFLGEKVSIERIGTDGDLDKMKQIISELDGEVDAFGLGGM CCCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCH DLYLAVGKYRYMLKDAQKVAQCCKNTPIVDGSGLKNSLERNALQQLNEHHNLFNSHDRVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE LVSALDRFGMAEKLSQLHSEVIYGDLIFSLGIPISIRSLHNLEKIARCALPVVRWLPFKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCEE LYPSGSKKNRTNGSQNKYEKYYDWADIICGDFHYINKYLPDNLEEKVIVTNTVTQEDEEN ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH LKNCGLKQLITTTPSLKGRSFGTNVMEALLIALKGGKQELKPREYETLLEELNFIPSIKD HHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCC LN CC >Mature Secondary Structure MKRVVSVSLGSSKRNHKVEEEFLGEKVSIERIGTDGDLDKMKQIISELDGEVDAFGLGGM CCCEEEEECCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEECCCCH DLYLAVGKYRYMLKDAQKVAQCCKNTPIVDGSGLKNSLERNALQQLNEHHNLFNSHDRVL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEE LVSALDRFGMAEKLSQLHSEVIYGDLIFSLGIPISIRSLHNLEKIARCALPVVRWLPFKL HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCEE LYPSGSKKNRTNGSQNKYEKYYDWADIICGDFHYINKYLPDNLEEKVIVTNTVTQEDEEN ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHH LKNCGLKQLITTTPSLKGRSFGTNVMEALLIALKGGKQELKPREYETLLEELNFIPSIKD HHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHCCCCCCC LN CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA