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The map label for this gene is spoVT [H]

Identifier: 188584710

GI number: 188584710

Start: 84784

End: 85338

Strand: Direct

Name: spoVT [H]

Synonym: Nther_0068

Alternate gene names: 188584710

Gene position: 84784-85338 (Clockwise)

Preceding gene: 188584709

Following gene: 188584711

Centisome position: 2.68

GC content: 38.74

Gene sequence:

>555_bases
GTGAAGGCAACCGGCATTGTTCGCAGAATAGATGATCTGGGCAGGGTAGTTATACCAAAAGAAATCAGAAGGACTTTGAG
AATAAGAGAAGGTGATCCCCTGGAGATTTTCGTTGACCGAGAAGGGGAAGTGATATTAAAAAAATATTCTCCAATAGGTG
AATTGGGAGAATTTGCAGAGGAATATGTTGAATCAATTCATGAAACTACCGGACATATAGCATGTATATCTGATCGAGAT
ATGATTATCTCAGTTGCTGGGACTGCAAAAAAAGAATTTTTAAATCGTCCACTATCACCTGCTGTGGATAGGGCTATGGA
AGAGCGGCAATCAGTGAAAATTGAAGATTCAGCAGATCATCCCTACTATCAAGAAGCTGAAGATGAGCAGAGAAGTAGAT
TTAAATCAGAAGTCATTGCCCCTATAATTGCCCAGGGAGATGCTATCGGTGCTGTAATAATTGGTACTAAAGAAAAAGAT
TATACAATGACAGATCAGGAATTAAAAATTGCAGAAACCGCAGCAGGATTTTTAGCAAAACAAATGGAACAGTAA

Upstream 100 bases:

>100_bases
GAAACTGAGGATGATTTTGTCTTTCTTGTATAAAAAGCACCAGCTAAATAAATACTAATTGTTGCAACCAATAATGTACC
CCAATAAAGGAGGTAAAACT

Downstream 100 bases:

>100_bases
AGGGAGCGCTAGTTTTGCGCTCCCTTTCGTTTTATCATTAAAAGTTTAATAGGGGAGGGGAGCTTATGATAAGTCAAAAC
AGAATATGCTTTGATATTCT

Product: AbrB family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDREGEVILKKYSPIGELGEFAEEYVESIHETTGHIACISDRD
MIISVAGTAKKEFLNRPLSPAVDRAMEERQSVKIEDSADHPYYQEAEDEQRSRFKSEVIAPIIAQGDAIGAVIIGTKEKD
YTMTDQELKIAETAAGFLAKQMEQ

Sequences:

>Translated_184_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDREGEVILKKYSPIGELGEFAEEYVESIHETTGHIACISDRD
MIISVAGTAKKEFLNRPLSPAVDRAMEERQSVKIEDSADHPYYQEAEDEQRSRFKSEVIAPIIAQGDAIGAVIIGTKEKD
YTMTDQELKIAETAAGFLAKQMEQ
>Mature_184_residues
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDREGEVILKKYSPIGELGEFAEEYVESIHETTGHIACISDRD
MIISVAGTAKKEFLNRPLSPAVDRAMEERQSVKIEDSADHPYYQEAEDEQRSRFKSEVIAPIIAQGDAIGAVIIGTKEKD
YTMTDQELKIAETAAGFLAKQMEQ

Specific function: Positive and negative transcriptional regulator of sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development [H]

COG id: COG2002

COG function: function code K; Regulators of stationary/sporulation gene expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis AbrB and Abh [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014213
- InterPro:   IPR006339
- InterPro:   IPR007159 [H]

Pfam domain/function: PF04014 SpoVT_AbrB [H]

EC number: NA

Molecular weight: Translated: 20694; Mature: 20694

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDREGEVILKKYSPIGELGEFAE
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYVESIHETTGHIACISDRDMIISVAGTAKKEFLNRPLSPAVDRAMEERQSVKIEDSADH
HHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCC
PYYQEAEDEQRSRFKSEVIAPIIAQGDAIGAVIIGTKEKDYTMTDQELKIAETAAGFLAK
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
QMEQ
HHCC
>Mature Secondary Structure
MKATGIVRRIDDLGRVVIPKEIRRTLRIREGDPLEIFVDREGEVILKKYSPIGELGEFAE
CCCHHHHHHHHHCCCEECCHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCHHHHHHHHH
EYVESIHETTGHIACISDRDMIISVAGTAKKEFLNRPLSPAVDRAMEERQSVKIEDSADH
HHHHHHHHCCCCEEEECCCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHCEECCCCCCC
PYYQEAEDEQRSRFKSEVIAPIIAQGDAIGAVIIGTKEKDYTMTDQELKIAETAAGFLAK
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
QMEQ
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 8755877 [H]