Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
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Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is abgT [H]
Identifier: 188584706
GI number: 188584706
Start: 78114
End: 79670
Strand: Direct
Name: abgT [H]
Synonym: Nther_0064
Alternate gene names: 188584706
Gene position: 78114-79670 (Clockwise)
Preceding gene: 188584705
Following gene: 188584708
Centisome position: 2.47
GC content: 41.23
Gene sequence:
>1557_bases ATGGCAGGTCAAAGTGAAACACCTACCCCACAAACGCCACAGACCCCAGAAGGGTCAGGTTTGTTTGAGAGAATTCTGAA TTTTATTGAAAGAGTAGGAAACAAACTTCCTCATCCTATCATTTTATTTTTCATTCTAGCTGGTTTAACTATCGTAGCTT CTTGGTTGGTATCAGCTGCTGGAGTAACTGTTGAACATCCAGGTACTGGCGAAACAGTTGAAGCTGTCAATTTAATATCA AGATATGGCTTTGAAAGAATAGTCACTGAAGCAGTTGATAATTTTGTTGGTTTTGCACCCTTAGGTGTTGTACTAGTAGC TATGCTAGGAGTTGGAGTAGCAGAGAAATCCGGACTCATAAATTCAGTGTTGAAATCTTTAATATTAGGCGCTCCTATGA AATTATTGACAGTAGCAGTAGTTCTAGTAGGTATTTTGTCCAGTGTTGCTACTGACGCAGGTTATGTAGTGGTAGTTCCC CTAGGTGCAATTATTTTCGCAGCCAAGGGACGCCATCCCATGGTTGGTTTGGCCGCAGCCTTCGCTGGTGTATCAGGTGG TTTCAGTGCCAACTTGATTATAACCAGTTTAGATCCATTGTTGACAGAACTTACAAGGGATGCTGCCGAAACATGGGTTG ACAGTTATCCCATGGCTCCTTCTGTTAACTTGTGGTTCATGATGGCATCGACGATCATAATCTCAGCAGTTGGTGCCATA GTAACAGAAAAGATAGTTGCCCCCCGTTTTGGAGAGTATACTGGTGATTACAAGCCAGAACTTGAACCTCTTAATAATCA GGAGAAAAGCGGTATCAAAGCAGCAGTTATTACTTTAATTATTTTGCTTGCTTTATTACTAGTGATGGCTGTTCCTGCAG ATGGCCTTCTCCGTGATGATGAAGGTTCACTGACTTCTATGCAAGCACCTTTAATGGGTGGTATGGTACCGATTATCATG GTACTATTCCTCTTACCTGGTATTGCTTATGGCTATGCTGCCAAAACAGTCAAAAACAGCACAGATGTAGCAAAATATAT GTCAGAGGCTATGTCGGATATGGGTGGTTATGTGGCCTTGGCTTTTGCCGCCGGTCAGTTTGTCAAATACTTCGAATGGT CACAGATAGGTACAATCCTGGCTGTTGCAGGAGCAGATTTCTTGCAGGCCATCGAATTTACAGGAATACCATTATTAATT GCCTTTGTAATCGTGGCAGGCTTTATCAATCTATTTGTTGGAAGTGCTTCTGCTAAATGGGCAATTATGGCTCCAGTATT TGTTCCTATGTTCATGGAATTAGGTTATGCTCCAGAACTAACACAAATGGCTTATCGTGTAGGAGACTCTGTCACCAATA TAATTACACCACTAATGCCATATTTTGCAGTAATCATCGCATTTGCCAAGAGATTTGACGAAAAAGTCGGAATTGGTACA CTTATTTCTACAATGCTTCCGTACTCCATTGTATTCTTGATTACTTGGACTATAATGCTAATTTTATGGTATGCGCTAAA CTTACCAATCGGACCAGGTGGACAAATGTTTGTCTAA
Upstream 100 bases:
>100_bases GAGGCAAAGAAAATTAGTCCTTGACATTTAAACAACCCCCTGTTTTAATAATACTTGGGAGTAATTTTTTTTAATAACTT AAAAAGGGGGAATTTTATTA
Downstream 100 bases:
>100_bases TCAAGTAGGGTACACTGATGATTCGTGAATGGAAATCCAATAGTATTTTATGTAATATACTCCCCTGGGTGAATCCAGGG GAGTATTTACTTGCATGAAA
Product: AbgT putative transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MAGQSETPTPQTPQTPEGSGLFERILNFIERVGNKLPHPIILFFILAGLTIVASWLVSAAGVTVEHPGTGETVEAVNLIS RYGFERIVTEAVDNFVGFAPLGVVLVAMLGVGVAEKSGLINSVLKSLILGAPMKLLTVAVVLVGILSSVATDAGYVVVVP LGAIIFAAKGRHPMVGLAAAFAGVSGGFSANLIITSLDPLLTELTRDAAETWVDSYPMAPSVNLWFMMASTIIISAVGAI VTEKIVAPRFGEYTGDYKPELEPLNNQEKSGIKAAVITLIILLALLLVMAVPADGLLRDDEGSLTSMQAPLMGGMVPIIM VLFLLPGIAYGYAAKTVKNSTDVAKYMSEAMSDMGGYVALAFAAGQFVKYFEWSQIGTILAVAGADFLQAIEFTGIPLLI AFVIVAGFINLFVGSASAKWAIMAPVFVPMFMELGYAPELTQMAYRVGDSVTNIITPLMPYFAVIIAFAKRFDEKVGIGT LISTMLPYSIVFLITWTIMLILWYALNLPIGPGGQMFV
Sequences:
>Translated_518_residues MAGQSETPTPQTPQTPEGSGLFERILNFIERVGNKLPHPIILFFILAGLTIVASWLVSAAGVTVEHPGTGETVEAVNLIS RYGFERIVTEAVDNFVGFAPLGVVLVAMLGVGVAEKSGLINSVLKSLILGAPMKLLTVAVVLVGILSSVATDAGYVVVVP LGAIIFAAKGRHPMVGLAAAFAGVSGGFSANLIITSLDPLLTELTRDAAETWVDSYPMAPSVNLWFMMASTIIISAVGAI VTEKIVAPRFGEYTGDYKPELEPLNNQEKSGIKAAVITLIILLALLLVMAVPADGLLRDDEGSLTSMQAPLMGGMVPIIM VLFLLPGIAYGYAAKTVKNSTDVAKYMSEAMSDMGGYVALAFAAGQFVKYFEWSQIGTILAVAGADFLQAIEFTGIPLLI AFVIVAGFINLFVGSASAKWAIMAPVFVPMFMELGYAPELTQMAYRVGDSVTNIITPLMPYFAVIIAFAKRFDEKVGIGT LISTMLPYSIVFLITWTIMLILWYALNLPIGPGGQMFV >Mature_517_residues AGQSETPTPQTPQTPEGSGLFERILNFIERVGNKLPHPIILFFILAGLTIVASWLVSAAGVTVEHPGTGETVEAVNLISR YGFERIVTEAVDNFVGFAPLGVVLVAMLGVGVAEKSGLINSVLKSLILGAPMKLLTVAVVLVGILSSVATDAGYVVVVPL GAIIFAAKGRHPMVGLAAAFAGVSGGFSANLIITSLDPLLTELTRDAAETWVDSYPMAPSVNLWFMMASTIIISAVGAIV TEKIVAPRFGEYTGDYKPELEPLNNQEKSGIKAAVITLIILLALLLVMAVPADGLLRDDEGSLTSMQAPLMGGMVPIIMV LFLLPGIAYGYAAKTVKNSTDVAKYMSEAMSDMGGYVALAFAAGQFVKYFEWSQIGTILAVAGADFLQAIEFTGIPLLIA FVIVAGFINLFVGSASAKWAIMAPVFVPMFMELGYAPELTQMAYRVGDSVTNIITPLMPYFAVIIAFAKRFDEKVGIGTL ISTMLPYSIVFLITWTIMLILWYALNLPIGPGGQMFV
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=490, Percent_Identity=35.7142857142857, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 55006; Mature: 54875
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGQSETPTPQTPQTPEGSGLFERILNFIERVGNKLPHPIILFFILAGLTIVASWLVSAA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GVTVEHPGTGETVEAVNLISRYGFERIVTEAVDNFVGFAPLGVVLVAMLGVGVAEKSGLI CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NSVLKSLILGAPMKLLTVAVVLVGILSSVATDAGYVVVVPLGAIIFAAKGRHPMVGLAAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCHHHHHHH FAGVSGGFSANLIITSLDPLLTELTRDAAETWVDSYPMAPSVNLWFMMASTIIISAVGAI HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VTEKIVAPRFGEYTGDYKPELEPLNNQEKSGIKAAVITLIILLALLLVMAVPADGLLRDD HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC EGSLTSMQAPLMGGMVPIIMVLFLLPGIAYGYAAKTVKNSTDVAKYMSEAMSDMGGYVAL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH AFAAGQFVKYFEWSQIGTILAVAGADFLQAIEFTGIPLLIAFVIVAGFINLFVGSASAKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH AIMAPVFVPMFMELGYAPELTQMAYRVGDSVTNIITPLMPYFAVIIAFAKRFDEKVGIGT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LISTMLPYSIVFLITWTIMLILWYALNLPIGPGGQMFV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AGQSETPTPQTPQTPEGSGLFERILNFIERVGNKLPHPIILFFILAGLTIVASWLVSAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC GVTVEHPGTGETVEAVNLISRYGFERIVTEAVDNFVGFAPLGVVLVAMLGVGVAEKSGLI CCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH NSVLKSLILGAPMKLLTVAVVLVGILSSVATDAGYVVVVPLGAIIFAAKGRHPMVGLAAA HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHCCCCCCHHHHHHH FAGVSGGFSANLIITSLDPLLTELTRDAAETWVDSYPMAPSVNLWFMMASTIIISAVGAI HHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH VTEKIVAPRFGEYTGDYKPELEPLNNQEKSGIKAAVITLIILLALLLVMAVPADGLLRDD HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC EGSLTSMQAPLMGGMVPIIMVLFLLPGIAYGYAAKTVKNSTDVAKYMSEAMSDMGGYVAL CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHH AFAAGQFVKYFEWSQIGTILAVAGADFLQAIEFTGIPLLIAFVIVAGFINLFVGSASAKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCH AIMAPVFVPMFMELGYAPELTQMAYRVGDSVTNIITPLMPYFAVIIAFAKRFDEKVGIGT HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH LISTMLPYSIVFLITWTIMLILWYALNLPIGPGGQMFV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]