Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
---|---|
Accession | NC_010718 |
Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is veg [H]
Identifier: 188584690
GI number: 188584690
Start: 62269
End: 62535
Strand: Direct
Name: veg [H]
Synonym: Nther_0048
Alternate gene names: 188584690
Gene position: 62269-62535 (Clockwise)
Preceding gene: 188584689
Following gene: 188584692
Centisome position: 1.97
GC content: 32.96
Gene sequence:
>267_bases ATGCCAGATTATAATGCCATTGGAGAAATTAAAGATTCCCTCGAGCAGTGTGTAGGAAAGAAGATTAAGCTCAAAGCAAA TGGTGGCAGAAAAAAAGTAATTGAAAAGGAAGGCATTCTTGAAAACACCTATCCATCATTATTTATAATAAGAGTTGACG AATCATCATTTAGCCAAAGATTCACTTTTAATTATGCAGATGTTTTGACAAAAACTGTGGAGTTAACCTTGATAGATGAT AAACAATGGAATTTAGCTGCCAAATAA
Upstream 100 bases:
>100_bases TAAGAAAAGACCCTTGACAAATATGGCGATTTGTTGCTACAATTAAATAATACTTGACAAGCAACCCCTGTCTATGTTAT ATTATTACAGGGGTGAAACT
Downstream 100 bases:
>100_bases AAAAGGTCCTATTTAGGACCTTTTTTATTTGGCATTTTTTTTATATTTAATTGAAAGGCCTTATTTCTAATTGCGTTCAT TGATCTATTAAAAATACGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MPDYNAIGEIKDSLEQCVGKKIKLKANGGRKKVIEKEGILENTYPSLFIIRVDESSFSQRFTFNYADVLTKTVELTLIDD KQWNLAAK
Sequences:
>Translated_88_residues MPDYNAIGEIKDSLEQCVGKKIKLKANGGRKKVIEKEGILENTYPSLFIIRVDESSFSQRFTFNYADVLTKTVELTLIDD KQWNLAAK >Mature_87_residues PDYNAIGEIKDSLEQCVGKKIKLKANGGRKKVIEKEGILENTYPSLFIIRVDESSFSQRFTFNYADVLTKTVELTLIDDK QWNLAAK
Specific function: Unknown
COG id: COG4466
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009366 [H]
Pfam domain/function: PF06257 DUF1021 [H]
EC number: NA
Molecular weight: Translated: 10027; Mature: 9895
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDYNAIGEIKDSLEQCVGKKIKLKANGGRKKVIEKEGILENTYPSLFIIRVDESSFSQR CCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCE FTFNYADVLTKTVELTLIDDKQWNLAAK EEECHHHHHHEEEEEEEECCCCCCCCCC >Mature Secondary Structure PDYNAIGEIKDSLEQCVGKKIKLKANGGRKKVIEKEGILENTYPSLFIIRVDESSFSQR CCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCE FTFNYADVLTKTVELTLIDDKQWNLAAK EEECHHHHHHEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377; 6181373 [H]