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The map label for this gene is hycF [C]

Identifier: 188584667

GI number: 188584667

Start: 36688

End: 36948

Strand: Direct

Name: hycF [C]

Synonym: Nther_0025

Alternate gene names: 188584667

Gene position: 36688-36948 (Clockwise)

Preceding gene: 188584666

Following gene: 188584669

Centisome position: 1.16

GC content: 39.46

Gene sequence:

>261_bases
GTGAGTGCAGCCGAAAACTATCAAAAATTAACCTATGAAAAAGAAGGAAAAGGTAAATGGCACTTATTTCCAGGACTATG
CAAGGGCTGCGGCCTTTGTATGGAAAAATGCCCTAAAAATGTGATCAGTTGGTCAGATCAATTGGGGGTTTATGGTACAC
CTGCAGTAGAAATTGACGCGGAAGGATGTATTTACTGCGGAATCTGTGAACAAGTATGTCCTGATGTTGCCATAAAAGTA
GAGAAAGAGAAAAAGAAATAA

Upstream 100 bases:

>100_bases
ACCCTAAATTGAGAGAAATGAATATGGAAGCCTTCGATAGAGGTATGGAACTGGCCAAGGAATCAGCAGAAGAAAAGATT
TAACGAGGGGGGTATTGATT

Downstream 100 bases:

>100_bases
ATTAAGGCTATAACTAAAAGGGTCCTGCTTGACTAGGCAGGATCCTTTTTATACATTGTAGTTAATTTTATTTTTTATTC
CCCTAGTTTTTTAATAATTG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: CO2; H2; oxidized ferredoxin + [C]

Alternate protein names: 2-OxoacidFerredoxin Oxidoreductase Delta Subunit; Ferredoxin

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MSAAENYQKLTYEKEGKGKWHLFPGLCKGCGLCMEKCPKNVISWSDQLGVYGTPAVEIDAEGCIYCGICEQVCPDVAIKV
EKEKKK

Sequences:

>Translated_86_residues
MSAAENYQKLTYEKEGKGKWHLFPGLCKGCGLCMEKCPKNVISWSDQLGVYGTPAVEIDAEGCIYCGICEQVCPDVAIKV
EKEKKK
>Mature_85_residues
SAAENYQKLTYEKEGKGKWHLFPGLCKGCGLCMEKCPKNVISWSDQLGVYGTPAVEIDAEGCIYCGICEQVCPDVAIKVE
KEKKK

Specific function: Probable Electron Transfer Protein For Hydrogenase 3 [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9520; Mature: 9389

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
9.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAAENYQKLTYEKEGKGKWHLFPGLCKGCGLCMEKCPKNVISWSDQLGVYGTPAVEIDA
CCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEECC
EGCIYCGICEQVCPDVAIKVEKEKKK
CCCEEECCHHHCCCCCEEEECCCCCC
>Mature Secondary Structure 
SAAENYQKLTYEKEGKGKWHLFPGLCKGCGLCMEKCPKNVISWSDQLGVYGTPAVEIDA
CCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCEEEECC
EGCIYCGICEQVCPDVAIKVEKEKKK
CCCEEECCHHHCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; Proton; reduced ferredoxin [C]

Specific reaction: formate = CO2 + H2 Proton + reduced ferredoxin = H2 + oxidized ferredoxin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA