Definition | Erwinia tasmaniensis Et1/99, complete genome. |
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Accession | NC_010694 |
Length | 3,883,467 |
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The map label for this gene is rhsA
Identifier: 188535141
GI number:
Start: 3370410
End: 3375374
Strand: Reverse
Name: rhsA
Synonym: ETA_30230
Alternate gene names: NA
Gene position: NA
Preceding gene: 188535142
Following gene: 188535140
Centisome position: NA
GC content: NA
Gene sequence:
>4965_bases ATGAAATCACCTTCTTTTTATTCCCAGGCGAGTAACTTTATCAGTGCCGTACAGGGAGGTGTCGATCCGCGCACCGGCCT TTTTAATTTTAATTTATCGTTGGTGAACCTGCACTCTGGCAAGCTGGCCGGCCCGGCACTGTCGCTATCGCTGCAATACT CGCCGTTATCATCGGATAACGAGGGATTTGGCCAGGGTTTTTCCCTCAACCTGACACGCTATAATATCGCGACCCGTAAG CTGGTGCTTTCCACTGGCGAGGAGTACTGCATCAGCAGCAGCGGAAAGACCGTTAAACAAAAAAAACTTAAAAACTTTAT TTTTGAAAATACCGATAACGAAAGCTACCGGGTCATTTACAAATCCGGACTTATCGAAAGCCTCTCCCCATTCGGCGTAA TGTTTCTTCCAACCCGTATCACGGCGCCTGATGGGCGAAGCCTTAGCCTGGTGTGGCGCTCATCGCACTCCCCGCCCCGG CTGGAGCAGATAACGGATGATGATGGCACGGTGCTGTGCGCCATATCCCATGCCGATGAGAGGCTTGCCACGCTAGCGTT CAAGGTGCTTCCAGACCATGCCGAATCGGGCTATCAGACCGTATTCAAATTTACCAATGCGTATCTGACCCGCGTAACCA GCAGCGCCGATACCGTTCCGCTTATATGGACATTTCATTACGATGATATCGGTCCTGGAAATGATTATCGGGCGATCACC AGCGTGACCTCGCCGACAGGGCTGAGGGAGCAGGTGACCTATTATCCTGACAGAGCAATGGCTTTCCCTGATATTGCAGG CCGTCACGCGCTGCCCTGCGTACACGTACATAAAATATTTCCGGGCGGCGGGCAGCCACGGACGGTCACGCTGTGGGACT GGACGGAGCATAACTATCTTGGCAGAGAGGCAGGGCAGAATCAGTGGCAGCCGGATACTGACGAAATGCTGATGATATTG CTCAACGACTACCGGTATGGCTCCACGGAAAAGGTGATGGGGATGGATGGCAGCACCGTGCTGAGCACGGTGACGCGCAG CTACAACAGCTATCATCTTCAGGTGTCAGAAAGCACGTTTCGCGACGGAAAAACGTTCCTTCACGCCACGCAATACCATG CCGTTCCGGGTGCGACTTTCGACGAACAGCCCGCCCAGTATGCTCTGCCCGCGCAGCAGACCGCATCCTGGGATGATGGC AGCGGCGCAACTTCGCGTACGCTTATGACCCGCTGGCAATTTGATGAAGCGGGTAATCCGCTGCGACAGGATGAACCAAA CGGCAGCGTCACCGAGTATGTCTATTACCCGGCAGAAGGTGAGGGTGAGGCCTGCCCGGCCGATCCGCATGGTTTTACCC GTTATCTGAAAAGTAAAACGCTTACCCCGCTTCGCATTAAGGGAGATGAACCCCTCTCACGAATGGTCAATACCTGGAAG CAGCAGGATGTCATCAACGGCAAAGGCTATGCCGTTGTGGACGATACAATAACGCGAACCGTGGGCAGCGCACGCCTATT TATCAGCCGTGACTACTACCGTGATGTGACTGACGACCTGACGTTTGGTCGTGAAAAGGCGCGGATTATCACCCTGACAC CCTGTCTGGAGGCCAGCGAAACCTACACCCGCCGGCAGTCTTTCACCTATCGATCCACGCCGCAGGGGCTGCGTCAGTCA GAGTCTTTTACCTCGCATGATGGCCTGACGGCCTATCACACTACATTGCGCCACCCCAGCCTCGGACATCTTCTGTCTGA AACGGATGCACAAGGCGTCACGGCAGTCCGCACTTACGATAAGGTTGGTCGGGTGTTAACCCACAGCGTGATGCCGGGGA TGCTACACGAAAGGAAAACGACATGGTCATATTCCATCGGGGACAAAGGCCCGGTCACCCTCGAAATGGATGCGGCAGGT AATCAGACAAAAACCTTTTTTGACGGTGCCGGCCGGGAATCAAGCTGCCGACGTCTTGATAGAGATGCCTCGCAGAAGTG GTTTGAGATCTCGTCACGGACATGGGGGCCGCTGGGGGAGATGGTTGCTGGCTCCTGCAACGACTGGTTGACCGATTCAT CAGTACCGCAGCGCCTCGGCACCTTCGTTTCATATGATGGCTGGGGCTGGATCGGTGAGCAAGGTTTTACGGACGGCACG AAGCTTGTGCAGGCCAACGACCCCATGCTGCTCACGCAAACGTTATCACTGCACGGTAGCGCGGACGGTGAAGATCTCAA CTCGGGGTCATTTACCACCGTACTGGAAGAACGTAGCCGCCTGCCGCTCTCGGAGGTCCGCAAAAATGCCGTCGGTCAGG CGCAGAGTGAACGATCCCATGAGTGGGATGGGCTTGGGCGCCTGCGGCTGGACACGGATGAACTTAATCATAAAACTGCC CTAAGTTACGACGCCTTCGGACGCGTGCTGACACACATCCTACCGGACAGCACTACGGTAACACGAACCTATGCCGCTCA CCTGACGGGCAATCAGGTCACCACCCTTAGCGTGACAGGCAAAGACTCTGACGGCAATCCGCGCACCTGGCTGCTCGGAA CGCAGGAGTTTGACGGTTTCGCCAGAGTCACTCAGCGTTCAAGCGGTGGGCGGGCCACCTTATACGCCTACGAAGCCGCC GCACCGCATCCCTCTTCAGTTACCCTGCCGTCAGGGAAAATCGTGAAGTGTACGCACGTCCCCGAGTTGGGTAACGTGCT GAGCAGTATGACGGTTGACGGAGTGGCGCAGGTGTTCGGCTATGACCCGGCGACGGGCCACCCGATCACGGCAGAGGAAG GGGATACCAGGATAGAGTATTCTCTGAACCCTTCCGGTAGCCTGAAGGCTGAACGCTTCACCCAGTGGAGCCTTTCGCGA GAAGCTGGCTATACCCGTACGCTGGCAGGAAAAATGGTGGCGTACAGGGATATAGCCGGTAAAAAAACCACCTGTGTACG GGATGCGACTGGACGATTAATCACGATGAAAGACGTGGATCTGACGGTCGACCTGGAGTATGACGCGCTGGGGCGACTGA ACTGGCAGTTGGTCACGAATATTGCCACGCAGGCTACGCTCATCACCCGGCTGACATTTAACGATTTTGGTTGGGAAACT GCCCGCATCATTTCTGACAGCAGTGGTGGCGAGCTGAAGGTGACGCAGAGCTGGCTGGCAAACGGCCTGATGGCGAGTCG GACGACTCTGCGGGATAAGGGCGTGTTACGAGAGGAGCGCTTCGCGTACGATGCCCGTAATCGTCTTGTCAGCTATACGG TGAGCGGTACCAGCCTGCCGCAGGATGCATATGGACATCAGATTACTGCACAGGCCTACCGATATGATGCGCTGAATAAC CTGACGATGATCACCACCCCGTTGATTTACGGCAGCATTGATGTTGCGACCTATTATTACGGAAACATCGCCGACCCCAC CCAGTTGACCGCAATAATACACTCCAGTATTGGCTATCCCAGGGTCATTCAGCTTGAGTATGATGCCGGTGGGCGCTTGA TTCGGGATGAGGCAGGGCGCGTGCTCTCCTATGACGCGATTGGCAGATTGACCGACATCAATGGCGAAAGCAGCTATGGC TATGATGCGCTCAACCGCATGATTAGCCAGAACATCAGGGGCAAGGATGGGCGACAGCTATACTACCGTGGTGCAGAGCT GGTGAATGAGGCTTTGGTAGAGCAGGGAGAGGTATCCCGTCTGATTAAGAATGGGCACAGCTGCCTGGGAATACGCGATG GCAGCAGTGTGACGTTGATGGCTGGCGATCGGCACGGCAGTCCGGTCTGGTCGCATGACGGCGGTCAGAAAGAAGGAAAA CAGCACTTTTGGTCACCCTACGGTACAGGAGAAGCGACCGACCTGCTGCCGGGTTTCAACGGTGAGCGGGTCGACCCGGT CAGCGGGTGCTACCACTTGGGTAATGGCTGTCGTACTTACAATCCTGTGCTGATGCGGTTTAATTCTCCGGACAGTCTTA GCCCGTTTGGCGGGGGCGGCATGAATGCTTATGCCTACTGCGCGGGAGATCCGTTAAATAACACTGACCCGTCTGGACAC ATGAGTTGGCAGGGGATAATGGGGATCGTGACGGGAGCGCTGGGGCTGGCCTTCTCAGCGTTCACTGCCGGGGCATCGAT AGCGGCTGCGGGGAGCGTGATGGCGGCTTTAGGCGCGGCATCGACAACCTCACTGGTCGCAGGAGGGTTAGGCCTGCTAG CCGATGCGACGGCCATCGCCAGCGGTGCGTCGCAAGACAATCATCCGCGCGCATCGGCCGTACTGGGCTGGGTATCAATG GCGACGGGGATTGCCGGCGTGGTGGCTGGGCTGACGCATATGGCGACGGCCCTTAGGGAAAATAAAACTAATCTGCATTT GTCACGGTTCGAAGAGATGGGGATCAGGTCACCCAAGGTGATAGGCATTCATGATTTTGGCGGTTACAACTCTGACCCCT ATACACCTTCAGTGCCCGTTCATGCCACCTACACGGCCATTGAATGGGATAGCGGCCTTCCCCGCCTAAATATCGTGGCG CATGGTCTTCCAGGACGCATACTTGTCGATCGTAACATATGGCTAGATGCCGATGCGCTTTATCACCTGTTGTACGAGCA TGGCGTAATCGACTATCACTATTATGAAATCAGAATGCTGGTTTGTCATAGCGCTGACCCTTCGTCTGAGGGAATAAGTG TGGCGCAACGTTTAGCGCAGTTAACGAATAAGCCGGTTGAAGGTTTCCATGGCATTATGACCATGCATGAAACGCTGAAT ATTACCGGTGTGCCCATTTCATCAGTAAGGATGGTTAATGACGCCTATATGAGAGGGGGGGAGTTTGCCGCGACTGAGTT TATGCACCGAAACCGCGATTTCATCACCATTGGACCACACCCCTTCGCGATAATGCCTAATATCCCGAAAACATTTTTTC CGTGA
Upstream 100 bases:
>100_bases CCCGACAGTCATGAGATTGAAATTGATAAAAAATAGTGCTTACCGTTATGACTTACCGCATCCGATGGATGTCGATCCTA TTCGCTAACGGAGCTAAATT
Downstream 100 bases:
>100_bases GGAAAAGGAAAACCGCGGTTGCCGCTGTCGCCTCTTGCAGGTCTTTAAGAAGGCCCGATCCTTCGGTTCGGCACTGACTG TGACGCCGTACATTATTCTG
Product: Nematicidal protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1654_residues MKSPSFYSQASNFISAVQGGVDPRTGLFNFNLSLVNLHSGKLAGPALSLSLQYSPLSSDNEGFGQGFSLNLTRYNIATRK LVLSTGEEYCISSSGKTVKQKKLKNFIFENTDNESYRVIYKSGLIESLSPFGVMFLPTRITAPDGRSLSLVWRSSHSPPR LEQITDDDGTVLCAISHADERLATLAFKVLPDHAESGYQTVFKFTNAYLTRVTSSADTVPLIWTFHYDDIGPGNDYRAIT SVTSPTGLREQVTYYPDRAMAFPDIAGRHALPCVHVHKIFPGGGQPRTVTLWDWTEHNYLGREAGQNQWQPDTDEMLMIL LNDYRYGSTEKVMGMDGSTVLSTVTRSYNSYHLQVSESTFRDGKTFLHATQYHAVPGATFDEQPAQYALPAQQTASWDDG SGATSRTLMTRWQFDEAGNPLRQDEPNGSVTEYVYYPAEGEGEACPADPHGFTRYLKSKTLTPLRIKGDEPLSRMVNTWK QQDVINGKGYAVVDDTITRTVGSARLFISRDYYRDVTDDLTFGREKARIITLTPCLEASETYTRRQSFTYRSTPQGLRQS ESFTSHDGLTAYHTTLRHPSLGHLLSETDAQGVTAVRTYDKVGRVLTHSVMPGMLHERKTTWSYSIGDKGPVTLEMDAAG NQTKTFFDGAGRESSCRRLDRDASQKWFEISSRTWGPLGEMVAGSCNDWLTDSSVPQRLGTFVSYDGWGWIGEQGFTDGT KLVQANDPMLLTQTLSLHGSADGEDLNSGSFTTVLEERSRLPLSEVRKNAVGQAQSERSHEWDGLGRLRLDTDELNHKTA LSYDAFGRVLTHILPDSTTVTRTYAAHLTGNQVTTLSVTGKDSDGNPRTWLLGTQEFDGFARVTQRSSGGRATLYAYEAA APHPSSVTLPSGKIVKCTHVPELGNVLSSMTVDGVAQVFGYDPATGHPITAEEGDTRIEYSLNPSGSLKAERFTQWSLSR EAGYTRTLAGKMVAYRDIAGKKTTCVRDATGRLITMKDVDLTVDLEYDALGRLNWQLVTNIATQATLITRLTFNDFGWET ARIISDSSGGELKVTQSWLANGLMASRTTLRDKGVLREERFAYDARNRLVSYTVSGTSLPQDAYGHQITAQAYRYDALNN LTMITTPLIYGSIDVATYYYGNIADPTQLTAIIHSSIGYPRVIQLEYDAGGRLIRDEAGRVLSYDAIGRLTDINGESSYG YDALNRMISQNIRGKDGRQLYYRGAELVNEALVEQGEVSRLIKNGHSCLGIRDGSSVTLMAGDRHGSPVWSHDGGQKEGK QHFWSPYGTGEATDLLPGFNGERVDPVSGCYHLGNGCRTYNPVLMRFNSPDSLSPFGGGGMNAYAYCAGDPLNNTDPSGH MSWQGIMGIVTGALGLAFSAFTAGASIAAAGSVMAALGAASTTSLVAGGLGLLADATAIASGASQDNHPRASAVLGWVSM ATGIAGVVAGLTHMATALRENKTNLHLSRFEEMGIRSPKVIGIHDFGGYNSDPYTPSVPVHATYTAIEWDSGLPRLNIVA HGLPGRILVDRNIWLDADALYHLLYEHGVIDYHYYEIRMLVCHSADPSSEGISVAQRLAQLTNKPVEGFHGIMTMHETLN ITGVPISSVRMVNDAYMRGGEFAATEFMHRNRDFITIGPHPFAIMPNIPKTFFP
Sequences:
NA
Specific function: NA
COG id: COG3209
COG function: function code M; Rhs family protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA