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The map label for this gene is 188527618

Identifier: 188527618

GI number: 188527618

Start: 816678

End: 817598

Strand: Reverse

Name: 188527618

Synonym: HPSH_04200

Alternate gene names: NA

Gene position: 817598-816678 (Counterclockwise)

Preceding gene: 188527619

Following gene: 188527614

Centisome position: 50.83

GC content: 34.31

Gene sequence:

>921_bases
TTGAAAAGTATCTTCAAAAAACTAGGTTCTGTCGCTCTTTATTTTTTAGTCATTTATGGGGGCTTAAACGCTATCAATAC
AGCATTATTACCGAGTGAATACAAAAAATTAGTGGCTTTAGGCTTTAAAAAAATCAAAACACTCCATCAAAGACATGACG
ACAAAGAAGTTACAGAAGAGGAAAAAGAATTCGCCACTAACGCTTTGAGAGAAAAATTACGAAATGATAGGGCGAGAGCG
GAGCAAATTCAAAAAAATATTGAAGCGTTTGAAAAAAAGAACAACTCTTCTATTCAAAAAAAAGCGACTAAGCACAAAGG
ATTACAAGAATTAAACGAAACTAACGCTAACCCTTTGAATGGCAATCCTAATAGTAATTCTTCCACTGAAACCAAATCTA
ATAAAGATGATAACTTTGATGAGATGATCAATAAGGTGAATGAAGCGTTTGTGAAACCTGCTACTCCGCTTGTGCCTAAT
GAGTGGAGAACACCTGAAATTGAAACCATTATCAATGAGTGTATTCTTTCAAGCAACGATTACGATGGGTTAAGAAAGTG
TTTGATCAAAGGCATCAAGGATCAAAAAATTCTTGCCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAAATAACA
AGTTTTCTAGACAACACTTGAGTGGTTTAAAGCTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCTTCGTGT
GCTATTTGTGAGAAGAGAAAAAAAGAAATGGAGCAAGAAAATAACTACCAAGATACTACAAATGCAAGTGAGTTTGGGGC
TACTGATACAAAAAAAAATGAAGCAAAAGATGCAACATTCTCAAACAATCGCTCTAAATCTGAACTGCCCAATAGCGTCA
TTAATCAAATAGAACAAAGCATCGCTCATGGAAAAAAATAG

Upstream 100 bases:

>100_bases
AAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGCTTTCTGCATACCGAAACAATGTTGCCAAGAATAATCCCTTT
GAATAGGAAAGGAGACACTC

Downstream 100 bases:

>100_bases
CGATCAAAATTATTAGCTCAAAAAAACAACTAGAGAAACAAATCCCAAAGGTTAGAAATCATAGCTTGTTGTCTCAGAAA
AGTCATTTAACAATAATCTT

Product: cag pathogenicity island protein (cagN, cag17)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEEEKEFATNALREKLRNDRARA
EQIQKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLNGNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPATPLVPN
EWRTPEIETIINECILSSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK

Sequences:

>Translated_306_residues
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEEEKEFATNALREKLRNDRARA
EQIQKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLNGNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPATPLVPN
EWRTPEIETIINECILSSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK
>Mature_306_residues
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEEEKEFATNALREKLRNDRARA
EQIQKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLNGNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPATPLVPN
EWRTPEIETIINECILSSNDYDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQSIAHGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34686; Mature: 34686

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECILSSND
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCEEEEHHH
AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQS
HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCCCHHHCCHHHHHHHHHH
IAHGKK
HHCCCC
>Mature Secondary Structure
MKSIFKKLGSVALYFLVIYGGLNAINTALLPSEYKKLVALGFKKIKTLHQRHDDKEVTEE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EKEFATNALREKLRNDRARAEQIQKNIEAFEKKNNSSIQKKATKHKGLQELNETNANPLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC
GNPNSNSSTETKSNKDDNFDEMINKVNEAFVKPATPLVPNEWRTPEIETIINECILSSND
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
YDGLRKCLIKGIKDQKILAPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEECCCCCEEEEHHH
AICEKRKKEMEQENNYQDTTNASEFGATDTKKNEAKDATFSNNRSKSELPNSVINQIEQS
HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCCCHHHCCHHHHHHHHHH
IAHGKK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA