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The map label for this gene is 188527586

Identifier: 188527586

GI number: 188527586

Start: 788507

End: 789553

Strand: Reverse

Name: 188527586

Synonym: HPSH_04040

Alternate gene names: NA

Gene position: 789553-788507 (Counterclockwise)

Preceding gene: 188527589

Following gene: 188527565

Centisome position: 49.08

GC content: 37.15

Gene sequence:

>1047_bases
ATGAAAGCTCAGTATTTCTTTTGGATTCTTTTTTTGATTGGTTTTTATTGGATGATCTATTTGTATCAAGATTTTTTAAT
GGACGCATTGATCGCTGGGCTTTTGTGCGTGGGGTTTTTTCAAGTGAAAGTTTTTTTAGATAAGCGCTTTTTCAATATTG
CCAGTTCGTTTTTATGCGTTTTGGTTTTAGCGAGCGTTTTGATCGTGCCGTTGTATTTTATTGTTTATAAAAGTTCTAAT
ATCATTTTTGAAATCAATTTTGAAAAATTTTCAGCCCTAATCAAATGGCTTAAAGGGATAATCACCGAAAATTTATCGCA
TTTTCCTACCATTCATGATGGAGTGAGCAAGTTTTTAGAAAATTTTAACGCCGCTTCAATCACGGGCTATTTGCTGAAAA
TAAGCAGCTATGTGGGAAAATACAGCTTGAAACTCATTACAGACGCTTTGTTTATCTTGGGGCTGTTGTTTTTCTTTTTT
TACTATGGGGAGAAATTCTATCGTTATTTTTTGGGGGTCTTGCCTCTTGGAATCAATCAAAGCAAAAAGATTTTTGAAGA
AGTGGCTGGGATTTTACGCATCGTGCTTTTAACTTCTCTCATCACGGTTATTTTAGAGGGCGTGGCGTTTGGGGCGATGA
TCGTATGGTTTGGGCATGACGGCTGGTCTTTAGGGATTTTATACGGCCTGGCGTCTTTGGTGCCGGCTGTTGGGGGGGCT
TTGATTTGGATCCCCATAGCGATTTATGAGCTTTATCATGGGAATGTGAATGAGGCGATTTTTATCGCTTTGTATTCCAT
TTTATTGATTAGCGTGCTGATTGATAGCGTGATCAAGCCAATTTTAATCGTCTTCATCAAAAAAAGAATCTTTAAAACCA
CCCTTAAAATCAACGAAATGCTGATTTTCTTTTCCATGATTGCTGGGATTTCACAATTTGGTTTTTGGGGGATTATTGTA
GGGCCTACTATCACGGCGTTTTTTATTGCGTTACTGCGATTGTATGAAAATTACTTTATCCAAAACGATCAAAAAGCATG
CGAATGA

Upstream 100 bases:

>100_bases
TTGGTTTTAATTATAAGTTAAAAGAGGTTTTTTATCCTTAAAAGAGCGTTTTTTAGCTAACATTTGATAATTTTTGGTTC
AGTTTAATGGGGATAATTTT

Downstream 100 bases:

>100_bases
TAAAGTCCTATGGCTCACAACGAAATTTTTTCATTCAATGCGAACGCAACTTTAAACCCATAATAGATGCAAATTTCATT
TTTTATAGCGGATCAAAGGG

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIASSFLCVLVLASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGEKFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACE

Sequences:

>Translated_348_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIASSFLCVLVLASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGEKFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACE
>Mature_348_residues
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIASSFLCVLVLASVLIVPLYFIVYKSSN
IIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLENFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFF
YYGEKFYRYFLGVLPLGINQSKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYGLASLVPAVGGA
LIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEMLIFFSMIAGISQFGFWGIIV
GPTITAFFIALLRLYENYFIQNDQKACE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39749; Mature: 39749

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIASSFLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLASVLIVPLYFIVYKSSNIIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLE
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYFLGVLPLGINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYGLASLVPAVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCH
LIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQKACE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MKAQYFFWILFLIGFYWMIYLYQDFLMDALIAGLLCVGFFQVKVFLDKRFFNIASSFLCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVLASVLIVPLYFIVYKSSNIIFEINFEKFSALIKWLKGIITENLSHFPTIHDGVSKFLE
HHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
NFNAASITGYLLKISSYVGKYSLKLITDALFILGLLFFFFYYGEKFYRYFLGVLPLGINQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SKKIFEEVAGILRIVLLTSLITVILEGVAFGAMIVWFGHDGWSLGILYGLASLVPAVGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHCCH
LIWIPIAIYELYHGNVNEAIFIALYSILLISVLIDSVIKPILIVFIKKRIFKTTLKINEM
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIFFSMIAGISQFGFWGIIVGPTITAFFIALLRLYENYFIQNDQKACE
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]