Click here to switch to the map view.

The map label for this gene is 188527531

Identifier: 188527531

GI number: 188527531

Start: 724859

End: 725614

Strand: Reverse

Name: 188527531

Synonym: HPSH_03765

Alternate gene names: NA

Gene position: 725614-724859 (Counterclockwise)

Preceding gene: 188527532

Following gene: 188527530

Centisome position: 45.11

GC content: 36.11

Gene sequence:

>756_bases
TTGGTTATTGAAACGCAACAAAACCCCAAAGAACCATTTGATCCTTGCAAAATAGCGCCCCAAAAAATCTCTTTTAATCA
AGTGGTTTTTAAAAAAATTAAAAGAAAACTCAACCACTTCATTGGAAATATTCTAGCTCGGACAGAAGTGTATAAGAAAC
TCGTGGCAAAATACGATGATCTCACAGGAAAATACGATGAACTCACAGGAAAATACGATGATCTCACAGGAAAATACGAT
GATCTCACAGGAAAATACGATGATCTCACAGGAAAATACGATGAACTCACAGGAAAATACGAATCCTTGTTGGCAAAAGA
GGCAAACATTAAAGAGACCTTTTGGGAAAGGCGTGCTGATAGTGAAAAAGAAGCGCTATTTTTAGAGCATTTTTACCTCA
CCAGCGTGTATGTTTCTACTACGGCAGGCTACTACCTCACGCCTAAGGGCGCTAAAACTTTTATAGAAGCTACGGAGCGT
TTTAAAATCATAGAGCCGGTGGATATGTTTATAAACAACCCCACTTACCATGATATTGCTAATTTTACCTATGTGCCTTG
CCCTGTTTCTTTGAATAAGCATGCTTTTAATAGCACCATTCAAAATGCGAAAAAGCCTGATATTTCATTAAAGCCCCCTA
AAAAGTCTTATTTTAATAATCTTTTTTATCATAAATTAAACACCAAAAAGTGCTTGAGAGCCTTTCACAAATACAGCAAA
CAATACAATCATTTAAAAACCCCTAAAGAGGTTTAA

Upstream 100 bases:

>100_bases
CAGAGGCTGAAGAGATTGATTATACAGAGATTGAAGAGACTATTGAAAACCATGAAGTTACCCCCCCCCCCCCAATTCCA
CACAAGATACGCAACAAGAT

Downstream 100 bases:

>100_bases
AAAGAGTGGGCTTTATGTTAGAATAAGTCTTTTTTATTATTCAAAGGAGATTGCAATGAATTTAGAAAAACTAGAAATTA
GCCATGACGCTAACGCTTTG

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Family

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MVIETQQNPKEPFDPCKIAPQKISFNQVVFKKIKRKLNHFIGNILARTEVYKKLVAKYDDLTGKYDELTGKYDDLTGKYD
DLTGKYDDLTGKYDELTGKYESLLAKEANIKETFWERRADSEKEALFLEHFYLTSVYVSTTAGYYLTPKGAKTFIEATER
FKIIEPVDMFINNPTYHDIANFTYVPCPVSLNKHAFNSTIQNAKKPDISLKPPKKSYFNNLFYHKLNTKKCLRAFHKYSK
QYNHLKTPKEV

Sequences:

>Translated_251_residues
MVIETQQNPKEPFDPCKIAPQKISFNQVVFKKIKRKLNHFIGNILARTEVYKKLVAKYDDLTGKYDELTGKYDDLTGKYD
DLTGKYDDLTGKYDELTGKYESLLAKEANIKETFWERRADSEKEALFLEHFYLTSVYVSTTAGYYLTPKGAKTFIEATER
FKIIEPVDMFINNPTYHDIANFTYVPCPVSLNKHAFNSTIQNAKKPDISLKPPKKSYFNNLFYHKLNTKKCLRAFHKYSK
QYNHLKTPKEV
>Mature_251_residues
MVIETQQNPKEPFDPCKIAPQKISFNQVVFKKIKRKLNHFIGNILARTEVYKKLVAKYDDLTGKYDELTGKYDDLTGKYD
DLTGKYDDLTGKYDELTGKYESLLAKEANIKETFWERRADSEKEALFLEHFYLTSVYVSTTAGYYLTPKGAKTFIEATER
FKIIEPVDMFINNPTYHDIANFTYVPCPVSLNKHAFNSTIQNAKKPDISLKPPKKSYFNNLFYHKLNTKKCLRAFHKYSK
QYNHLKTPKEV

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29292; Mature: 29292

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIETQQNPKEPFDPCKIAPQKISFNQVVFKKIKRKLNHFIGNILARTEVYKKLVAKYDD
CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGKYDELTGKYDDLTGKYDDLTGKYDDLTGKYDELTGKYESLLAKEANIKETFWERRAD
CCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC
SEKEALFLEHFYLTSVYVSTTAGYYLTPKGAKTFIEATERFKIIEPVDMFINNPTYHDIA
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHC
NFTYVPCPVSLNKHAFNSTIQNAKKPDISLKPPKKSYFNNLFYHKLNTKKCLRAFHKYSK
CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
QYNHLKTPKEV
HHHHCCCCCCC
>Mature Secondary Structure
MVIETQQNPKEPFDPCKIAPQKISFNQVVFKKIKRKLNHFIGNILARTEVYKKLVAKYDD
CCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTGKYDELTGKYDDLTGKYDDLTGKYDDLTGKYDELTGKYESLLAKEANIKETFWERRAD
CCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCC
SEKEALFLEHFYLTSVYVSTTAGYYLTPKGAKTFIEATERFKIIEPVDMFINNPTYHDIA
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCHHHHHHCCCCHHHHC
NFTYVPCPVSLNKHAFNSTIQNAKKPDISLKPPKKSYFNNLFYHKLNTKKCLRAFHKYSK
CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
QYNHLKTPKEV
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA