| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is dgkA [H]
Identifier: 188527453
GI number: 188527453
Start: 638647
End: 639033
Strand: Reverse
Name: dgkA [H]
Synonym: HPSH_03355
Alternate gene names: 188527453
Gene position: 639033-638647 (Counterclockwise)
Preceding gene: 188527454
Following gene: 188527452
Centisome position: 39.73
GC content: 40.83
Gene sequence:
>387_bases ATGAGTGATTTCAAAGTCCCCCCCAAAGCTAAAGGGTTTAAACGCCTTTTTAAAGCCCTTTTTTATTCTAAAGACGGGCT TAAATGCGCATGGGTTGAAGAGAGCGCGTTCAGGCAAATTGCCATCTTGGCTCTTTTTTGTATCGTTCTAGCGAGCTATC TGACCAAAGATTTTTTAGAATGGGGGCTATTGATCTTACCTTGTTTTTTGTCGGTGGTCATTGAATTGATCAACAGCTCT ATTGAAAAGGCTGTGGATTTTACCAGCAAAGAGTTCCACCCTTTAGCTAAAAAGGCTAAAGACATGGCCAGTTCAGCCCA ACTGATAGGGCTTATTTTTTGGGCTTTCATTTGGGGGCATTATCTTTTAACGCTTTATTTGGAGTAA
Upstream 100 bases:
>100_bases ATCGCTCTTAACGCCCAAGCTAAAGACAACGCCAAGCTGACTTTTAACGCCCTGTTAGAAAGCCTTAGCGTGAATTTCTT TCAATCTTACAAAATAAACC
Downstream 100 bases:
>100_bases TTAAATTTTAGGGAGACACATGCAAGATAATTTAATCAATGAAACAAAAAATATTGTAGAAGTGGGGATTGATTCTTCTA TTGAAGAAAGCTATTTAGCT
Product: diacylglycerol kinase
Products: NA
Alternate protein names: DAGK; Diglyceride kinase; DGK [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSS IEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE
Sequences:
>Translated_128_residues MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSS IEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE >Mature_127_residues SDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSI EKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE
Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]
COG id: COG0818
COG function: function code M; Diacylglycerol kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial diacylglycerol kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790475, Length=112, Percent_Identity=40.1785714285714, Blast_Score=93, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000829 [H]
Pfam domain/function: PF01219 DAGK_prokar [H]
EC number: =2.7.1.107 [H]
Molecular weight: Translated: 14618; Mature: 14486
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS01069 DAGK_PROKAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLE CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH WGLLILPCFLSVVIELINSSIEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLTLYLE HHHHHHCC >Mature Secondary Structure SDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLE CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH WGLLILPCFLSVVIELINSSIEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLLTLYLE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]