Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is dgkA [H]

Identifier: 188527453

GI number: 188527453

Start: 638647

End: 639033

Strand: Reverse

Name: dgkA [H]

Synonym: HPSH_03355

Alternate gene names: 188527453

Gene position: 639033-638647 (Counterclockwise)

Preceding gene: 188527454

Following gene: 188527452

Centisome position: 39.73

GC content: 40.83

Gene sequence:

>387_bases
ATGAGTGATTTCAAAGTCCCCCCCAAAGCTAAAGGGTTTAAACGCCTTTTTAAAGCCCTTTTTTATTCTAAAGACGGGCT
TAAATGCGCATGGGTTGAAGAGAGCGCGTTCAGGCAAATTGCCATCTTGGCTCTTTTTTGTATCGTTCTAGCGAGCTATC
TGACCAAAGATTTTTTAGAATGGGGGCTATTGATCTTACCTTGTTTTTTGTCGGTGGTCATTGAATTGATCAACAGCTCT
ATTGAAAAGGCTGTGGATTTTACCAGCAAAGAGTTCCACCCTTTAGCTAAAAAGGCTAAAGACATGGCCAGTTCAGCCCA
ACTGATAGGGCTTATTTTTTGGGCTTTCATTTGGGGGCATTATCTTTTAACGCTTTATTTGGAGTAA

Upstream 100 bases:

>100_bases
ATCGCTCTTAACGCCCAAGCTAAAGACAACGCCAAGCTGACTTTTAACGCCCTGTTAGAAAGCCTTAGCGTGAATTTCTT
TCAATCTTACAAAATAAACC

Downstream 100 bases:

>100_bases
TTAAATTTTAGGGAGACACATGCAAGATAATTTAATCAATGAAACAAAAAATATTGTAGAAGTGGGGATTGATTCTTCTA
TTGAAGAAAGCTATTTAGCT

Product: diacylglycerol kinase

Products: NA

Alternate protein names: DAGK; Diglyceride kinase; DGK [H]

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSS
IEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE

Sequences:

>Translated_128_residues
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSS
IEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE
>Mature_127_residues
SDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLEWGLLILPCFLSVVIELINSSI
EKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGHYLLTLYLE

Specific function: Recycling of diacylglycerol produced during the turnover of membrane phospholipid [H]

COG id: COG0818

COG function: function code M; Diacylglycerol kinase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial diacylglycerol kinase family [H]

Homologues:

Organism=Escherichia coli, GI1790475, Length=112, Percent_Identity=40.1785714285714, Blast_Score=93, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000829 [H]

Pfam domain/function: PF01219 DAGK_prokar [H]

EC number: =2.7.1.107 [H]

Molecular weight: Translated: 14618; Mature: 14486

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01069 DAGK_PROKAR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLE
CCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGLLILPCFLSVVIELINSSIEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLTLYLE
HHHHHHCC
>Mature Secondary Structure 
SDFKVPPKAKGFKRLFKALFYSKDGLKCAWVEESAFRQIAILALFCIVLASYLTKDFLE
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGLLILPCFLSVVIELINSSIEKAVDFTSKEFHPLAKKAKDMASSAQLIGLIFWAFIWGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLTLYLE
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]