Click here to switch to the map view.

The map label for this gene is 188527443

Identifier: 188527443

GI number: 188527443

Start: 625296

End: 626516

Strand: Reverse

Name: 188527443

Synonym: HPSH_03305

Alternate gene names: NA

Gene position: 626516-625296 (Counterclockwise)

Preceding gene: 188527444

Following gene: 188527436

Centisome position: 38.95

GC content: 39.31

Gene sequence:

>1221_bases
ATGTATGCGGCTCATCCTATTAAACTCCTAAAAGCCCCTAAACTCAAAACTAAATTTTTGAGGCGTGTGTTTGTGGGTGC
GTCTATTAGGCGTTGGAATGACCAAGCATGCCCTTTGGAATTTGTGGAATTAGACAAGCAAGCCCATAAAGCGATGATTG
CGTATTTGCTCGCTAAAGATTTAAAAGACAGGGGCAAAGACTTGGATTTAGATCTTTTAATCAAGTATTTTTGCTTTGAA
TTTTTGGAGCGCTTGGTTTTAACCGATATTAAACCCCCTATTTTTTACGCCCTCCAACAAACGCACAGCCAAGAATTAGC
CTCCTATGTCGCGCAAAGTTTGCAAGATGAAATCAGCGCGTATTTTTCTTTAGAGGAATTAAAAGAGTATTTAAGCCACA
GGCCCCAAGTTTTAGAAACTCAAATTTTAGAGAGCGCGCATTTTTATGCGTCTAAGTGGGAATTTGATATTATTTATCAT
TTTAACCCCAACATGTATGGCGTGAAAGAAATTAAAGATAAGATTGATAAGCAACTCCACAATAACGAGCATTTGTTTGA
AGGGCTTTTTGGGGAAAAAGAAGATCTGAAAAAATTGGTGAGCATGTTTGGGCAGTTGCGTTTCCAAAAGCGCTGGAGCC
AGACCCCAAGAGTGCCGCAAACCAGTGTCTTAGGGCATACCTTATGCGTGGCGATTATGGGGTATTTGTTGAGCTTTGAT
TTAAAAGCTTGTAAAAGCATGCGGATCAATCATTTTTTGGGCGGGCTTTTCCATGATCTACCCGAGATTTTAACCCGAGA
TATTATCACGCCCATCAAACAAAGCGTTGCGGGGCTTGATAACTGCATTAAAGAAATTGAAAAAAAGGAAATGCAAAACA
AAGTCTATTCCTTTGTCTCTTTGGGCGTTCAAGAAGATTTGAAATATTTCACCGAAAACGAGTTTAAAAACCGCTACAAA
GACAAGTCCCATCAAATCATTTTCACTAAAGACGCTGAAGAATTATTCACGCTTTATAACAGCGATGAATATCTTGGGGT
TTGTGGGGAGCTTTTGAAGGTGTGCGATCATTTGAGCGCGTTTTTAGAAGCTCAAATCTCTCTTTCTCATGGCATTTCCA
GTAACGATTTGATTAAAGGGGCTCAAAACCTTTTAGAATTGCGATCCCAAACAGAACTGCTTGATTTGGATTTAGGGAAA
TTGTTTAGGGATTTTAAGTGA

Upstream 100 bases:

>100_bases
TTGGTAGTGGTGCGTTAAGGTTTTTCACTTGCGTGATCAAATCAATAGTTCCTAATAAGATCATAGCTTTAATATTCAAA
ATAGTATAAAAAGGAAAGTT

Downstream 100 bases:

>100_bases
TTTATAGCTCTATTTAATAGCGTATTGGTTATAAAATCTAAAAAATGCTCGAAAGCATGTTTAAGACAACCAACTAAAGA
GCATTAAAAAGCGTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: HAD Superfamily Hydrolase; Competence Protein ComGF; Metal Dependent Phosphohydrolase; Metal-Dependent Phosphohydrolase HD Region; Cytoplasmic HAD Superfamily Hydrolase

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MYAAHPIKLLKAPKLKTKFLRRVFVGASIRRWNDQACPLEFVELDKQAHKAMIAYLLAKDLKDRGKDLDLDLLIKYFCFE
FLERLVLTDIKPPIFYALQQTHSQELASYVAQSLQDEISAYFSLEELKEYLSHRPQVLETQILESAHFYASKWEFDIIYH
FNPNMYGVKEIKDKIDKQLHNNEHLFEGLFGEKEDLKKLVSMFGQLRFQKRWSQTPRVPQTSVLGHTLCVAIMGYLLSFD
LKACKSMRINHFLGGLFHDLPEILTRDIITPIKQSVAGLDNCIKEIEKKEMQNKVYSFVSLGVQEDLKYFTENEFKNRYK
DKSHQIIFTKDAEELFTLYNSDEYLGVCGELLKVCDHLSAFLEAQISLSHGISSNDLIKGAQNLLELRSQTELLDLDLGK
LFRDFK

Sequences:

>Translated_406_residues
MYAAHPIKLLKAPKLKTKFLRRVFVGASIRRWNDQACPLEFVELDKQAHKAMIAYLLAKDLKDRGKDLDLDLLIKYFCFE
FLERLVLTDIKPPIFYALQQTHSQELASYVAQSLQDEISAYFSLEELKEYLSHRPQVLETQILESAHFYASKWEFDIIYH
FNPNMYGVKEIKDKIDKQLHNNEHLFEGLFGEKEDLKKLVSMFGQLRFQKRWSQTPRVPQTSVLGHTLCVAIMGYLLSFD
LKACKSMRINHFLGGLFHDLPEILTRDIITPIKQSVAGLDNCIKEIEKKEMQNKVYSFVSLGVQEDLKYFTENEFKNRYK
DKSHQIIFTKDAEELFTLYNSDEYLGVCGELLKVCDHLSAFLEAQISLSHGISSNDLIKGAQNLLELRSQTELLDLDLGK
LFRDFK
>Mature_406_residues
MYAAHPIKLLKAPKLKTKFLRRVFVGASIRRWNDQACPLEFVELDKQAHKAMIAYLLAKDLKDRGKDLDLDLLIKYFCFE
FLERLVLTDIKPPIFYALQQTHSQELASYVAQSLQDEISAYFSLEELKEYLSHRPQVLETQILESAHFYASKWEFDIIYH
FNPNMYGVKEIKDKIDKQLHNNEHLFEGLFGEKEDLKKLVSMFGQLRFQKRWSQTPRVPQTSVLGHTLCVAIMGYLLSFD
LKACKSMRINHFLGGLFHDLPEILTRDIITPIKQSVAGLDNCIKEIEKKEMQNKVYSFVSLGVQEDLKYFTENEFKNRYK
DKSHQIIFTKDAEELFTLYNSDEYLGVCGELLKVCDHLSAFLEAQISLSHGISSNDLIKGAQNLLELRSQTELLDLDLGK
LFRDFK

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47241; Mature: 47241

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA