Click here to switch to the map view.

The map label for this gene is 188527435

Identifier: 188527435

GI number: 188527435

Start: 617969

End: 618439

Strand: Reverse

Name: 188527435

Synonym: HPSH_03265

Alternate gene names: NA

Gene position: 618439-617969 (Counterclockwise)

Preceding gene: 188527436

Following gene: 188527434

Centisome position: 38.45

GC content: 39.28

Gene sequence:

>471_bases
ATGAAAAAAGCGTTGAAAATACTTTCTGTTAGCGCGTTGCTATTTGTGGCTTTAAACGCCAAAGATTTCAGCAAAACAAG
CGATGAGGATTTGGCTAAAATGGCTGGCATTGTCGCTCCGCAGGATATTGTGGATTATAAAAAAGAGTTGAGAATGCGCA
TGAAAAAAATGCCTAAAGACAAAAGAGAAGCGTTCCATAAGCAGTTGCATGAATATGCGATTAAAAACACAGACAACATG
ACCGTGGCGGATTTTGAAGCGCACAAAAAAGCCGTTAAAGAAGCGCTTAAAAAAAGCAACATGAAGGACATGGATGATGA
TTTGGGGTTGAGATCATGCAAGCATGGGAAAATGCATAAACACCACAAACACGATGGTCAAAATAAAGCAAAAGGGCATG
ATAAAGGGCATGGTGAAGAACAAGGCAAAAAAGATCACGATCATGATGATCATGGCGAAAATGAGAAATAA

Upstream 100 bases:

>100_bases
TGCAGCGGCGATACGAGAAAAGTTTGGTGTAGGGCTGTTAAGAAAAAAGACGAACATTGCTCTCCTAAGTGAGATAAAAT
TTAATTTAAAAGGATAAAAC

Downstream 100 bases:

>100_bases
AGCTTAAACCACACCACTTTTCTATCAAAGCTTCAAACCCTTTAAGCAGAAATCCTAAACGCTTTTAGCGTTTGGGATAG
AAGCATGTTATTATATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGIVAPQDIVDYKKELRMRMKKMPKDKREAFHKQLHEYAIKNTDNM
TVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHKHHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK

Sequences:

>Translated_156_residues
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGIVAPQDIVDYKKELRMRMKKMPKDKREAFHKQLHEYAIKNTDNM
TVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHKHHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK
>Mature_156_residues
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGIVAPQDIVDYKKELRMRMKKMPKDKREAFHKQLHEYAIKNTDNM
TVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHKHHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17851; Mature: 17851

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGIVAPQDIVDYKKELRMRMKKMPKD
CCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH
KREAFHKQLHEYAIKNTDNMTVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHK
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH
HHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKALKILSVSALLFVALNAKDFSKTSDEDLAKMAGIVAPQDIVDYKKELRMRMKKMPKD
CCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCH
KREAFHKQLHEYAIKNTDNMTVADFEAHKKAVKEALKKSNMKDMDDDLGLRSCKHGKMHK
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHH
HHKHDGQNKAKGHDKGHGEEQGKKDHDHDDHGENEK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA