Click here to switch to the map view.

The map label for this gene is 188527175

Identifier: 188527175

GI number: 188527175

Start: 366519

End: 367142

Strand: Direct

Name: 188527175

Synonym: HPSH_01910

Alternate gene names: NA

Gene position: 366519-367142 (Clockwise)

Preceding gene: 188527174

Following gene: 188527176

Centisome position: 22.79

GC content: 37.34

Gene sequence:

>624_bases
ATGCTAAGGGTTTTAAGCGTTGGTGTTGTTTTTATTTTGTTAGGGTGTCAGTTTTTCAACAAAACGACACTCCATTTGAA
ATATAAAGATTACCCCAAAAATAGCGCTTTAAAAACCGCTTTCACTTTAACCCCCCCTAAAATCTTTTTTAACGCCCGTT
TTGTGCCGCCCTTTTACCAAAAAGAATTTAAAAAAGCAATCATCCAACAAATCGCTTATTTTTTAAAAGATAAAAGCGCC
TTTACCCTCAATGTTTCAGGCAATGTTTTTTTTTCTTTTGAAGAGAGTCCTAAAGATTTAAAAGCCATTAAAGAAAGGCT
TAAAAAGACGATTGAGCCTAACGCTGACCCAAAATCCGTCATGCGTTTTTTAAACCTTCAAGCGAGCTTGATTTTAGAAT
GCGTCCCGCAAACAACTTGCCCGTTTGACACCCTTTTAATCCCCACCGCTTTCAGCGTGCCTGTTTATTACGCTAATCGT
TTGGGCGATAACCCTTCTCTTTTTTCCCAAGAAGATAAAACCTATCATAACGCTTTAATCAAAGCCCTTAATAAGGCTTA
CTATTCTCTTATGGAGGGTTTAGAAAAGCGTTTGAACGCTATAGAAAATGCAGAGTGGCTTTAA

Upstream 100 bases:

>100_bases
AATTGAAACAAAATCGCTTGATCATTCTCATCTCGCACAACCCAAGCACGCTAAAATTAGCCACTAAGCATGTGAAATTA
GAGCATGGGCGTTTGATAGA

Downstream 100 bases:

>100_bases
GGCATGAAAAAGATTGTATTTTTTATTTTTGTCATTTTGTTTTCGGTAGGGATTTATTTAGCGTGGCATGTTTTATTGGA
AAAAGCCCTAGAATTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLRVLSVGVVFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAIIQQIAYFLKDKSA
FTLNVSGNVFFSFEESPKDLKAIKERLKKTIEPNADPKSVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR
LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIENAEWL

Sequences:

>Translated_207_residues
MLRVLSVGVVFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAIIQQIAYFLKDKSA
FTLNVSGNVFFSFEESPKDLKAIKERLKKTIEPNADPKSVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR
LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIENAEWL
>Mature_207_residues
MLRVLSVGVVFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQKEFKKAIIQQIAYFLKDKSA
FTLNVSGNVFFSFEESPKDLKAIKERLKKTIEPNADPKSVMRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANR
LGDNPSLFSQEDKTYHNALIKALNKAYYSLMEGLEKRLNAIENAEWL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23755; Mature: 23755

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVLSVGVVFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQ
CCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCHHEEECCCCCHHHH
KEFKKAIIQQIAYFLKDKSAFTLNVSGNVFFSFEESPKDLKAIKERLKKTIEPNADPKSV
HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH
MRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANRLGDNPSLFSQEDKTYHNALI
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
KALNKAYYSLMEGLEKRLNAIENAEWL
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLRVLSVGVVFILLGCQFFNKTTLHLKYKDYPKNSALKTAFTLTPPKIFFNARFVPPFYQ
CCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCEEEEECCCCHHEEECCCCCHHHH
KEFKKAIIQQIAYFLKDKSAFTLNVSGNVFFSFEESPKDLKAIKERLKKTIEPNADPKSV
HHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHH
MRFLNLQASLILECVPQTTCPFDTLLIPTAFSVPVYYANRLGDNPSLFSQEDKTYHNALI
HHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
KALNKAYYSLMEGLEKRLNAIENAEWL
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA