Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527150

Identifier: 188527150

GI number: 188527150

Start: 334789

End: 335574

Strand: Direct

Name: 188527150

Synonym: HPSH_01785

Alternate gene names: NA

Gene position: 334789-335574 (Clockwise)

Preceding gene: 188527149

Following gene: 188527151

Centisome position: 20.81

GC content: 40.46

Gene sequence:

>786_bases
ATGTTTTGTTGTTTTAAAAACATTCTGTATGCAAGCGTGATTGTGGGGGTGTTGTTGGGTTTGTGGCGTTTGACTTACGA
TAAGTTCTGCTCCTCGTTGCTCTTTGTGTTGCTGATACTAGGGATTGTCGCTTACAGCTATATTTCTTTAAAAATGCATC
AGAGGAAGTGCTTCGCCAAGTGTTTTGTGAATAAAAAATCCTGTTTGTCCAAGATGCTACTCTCCCCAATAATGGTGTCT
TGTTTTTATGTTATTTTTTCAATTTTCACATCCGTATCCATCGCCTATAGCGTGCTGGACTATAATTGGATGATGTGGGG
GCTTGTTTTTTGCACTATCGTTGTTTGCGCTGCGGTGTTTGGCGTGTTTGAAAAGATGCTCAAGAATATCATCAAAGAAG
ATTATTTGATGCTGATGTCTAGAGAAGCGAGCTCTTCTATAGGGGCTCTTTTCTTCGTTGTCTTGAGTTGCTATGTGATT
TTTCATGGCAACATACCCGGTTATTTGAAACCAGCTTTGATAGACACTATTAAGGCAGCGAGTGATTCCATCTATTCTAG
CTGCGACTACATGGATTATTTTTTGAAGGCTAGAAAGATGTTAGAGGGGTTTGCTTGGTGGGGCATGTTCAAAGCAGAGA
GCATGGGCATGAATAAGGGATTTATGGTTGCGGGCTGGGTAGTGTTTATCATCTATAACGCTCTTAGTGGGATAGCCATC
AGCAGGTTGAGCGCTCAAATCATTTATTGTTTATCAAAATATTTTAGGGGTGAGTGTGGAAAATGA

Upstream 100 bases:

>100_bases
TATATTCTCACTATCCTTGATACTGGTAGCGTTTAAGATCTTTCTCCTCAAAGATAACCCTAACAAACGCATCAAAAAAC
AATAAGAGGGATAAAAGATA

Downstream 100 bases:

>100_bases
TGTTAAAGAAGATCTAGAGCAAGCAAGACCAAAGCAAGAGCTAGAAAAACAAAAGCAAGAGTTAGAAAAGCTAACACAAG
AAAAAGAACAAGAGATTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MFCCFKNILYASVIVGVLLGLWRLTYDKFCSSLLFVLLILGIVAYSYISLKMHQRKCFAKCFVNKKSCLSKMLLSPIMVS
CFYVIFSIFTSVSIAYSVLDYNWMMWGLVFCTIVVCAAVFGVFEKMLKNIIKEDYLMLMSREASSSIGALFFVVLSCYVI
FHGNIPGYLKPALIDTIKAASDSIYSSCDYMDYFLKARKMLEGFAWWGMFKAESMGMNKGFMVAGWVVFIIYNALSGIAI
SRLSAQIIYCLSKYFRGECGK

Sequences:

>Translated_261_residues
MFCCFKNILYASVIVGVLLGLWRLTYDKFCSSLLFVLLILGIVAYSYISLKMHQRKCFAKCFVNKKSCLSKMLLSPIMVS
CFYVIFSIFTSVSIAYSVLDYNWMMWGLVFCTIVVCAAVFGVFEKMLKNIIKEDYLMLMSREASSSIGALFFVVLSCYVI
FHGNIPGYLKPALIDTIKAASDSIYSSCDYMDYFLKARKMLEGFAWWGMFKAESMGMNKGFMVAGWVVFIIYNALSGIAI
SRLSAQIIYCLSKYFRGECGK
>Mature_261_residues
MFCCFKNILYASVIVGVLLGLWRLTYDKFCSSLLFVLLILGIVAYSYISLKMHQRKCFAKCFVNKKSCLSKMLLSPIMVS
CFYVIFSIFTSVSIAYSVLDYNWMMWGLVFCTIVVCAAVFGVFEKMLKNIIKEDYLMLMSREASSSIGALFFVVLSCYVI
FHGNIPGYLKPALIDTIKAASDSIYSSCDYMDYFLKARKMLEGFAWWGMFKAESMGMNKGFMVAGWVVFIIYNALSGIAI
SRLSAQIIYCLSKYFRGECGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29633; Mature: 29633

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA