Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188527141

Identifier: 188527141

GI number: 188527141

Start: 331775

End: 331849

Strand: Direct

Name: 188527141

Synonym: HPSH_01740

Alternate gene names: NA

Gene position: 331775-331849 (Clockwise)

Preceding gene: 188527140

Following gene: 188527142

Centisome position: 20.63

GC content: 40.0

Gene sequence:

>75_bases
ATGCTAGAAAATTTCAAAAAAGCTATTTTTAGGGCTTTGTGTTTGTGTTGTGCGTTGATTGGGGGGGGGGGTTAA

Upstream 100 bases:

>100_bases
GGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAATCGCTAGATTTGATTGCAATTTGATTATAATAAAGTTTAATTT
TTTTAAAAGGGAGAAGCGTC

Downstream 100 bases:

>100_bases
TGGCAAAGCTAAACCCTGAAGAGCTTTTCAATTTGGGTATGCTGAGTTATGACAAGCAAGATTTTTCTAAAGCTAGGAAG
TATTTTGAAAAAGCGTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 24; Mature: 24

Protein sequence:

>24_residues
MLENFKKAIFRALCLCCALIGGGG

Sequences:

>Translated_24_residues
MLENFKKAIFRALCLCCALIGGGG
>Mature_24_residues
MLENFKKAIFRALCLCCALIGGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 2529; Mature: 2529

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

12.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
16.7 %Cys+Met (Translated Protein)
12.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
16.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENFKKAIFRALCLCCALIGGGG
CCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLENFKKAIFRALCLCCALIGGGG
CCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA