Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527132

Identifier: 188527132

GI number: 188527132

Start: 325150

End: 326022

Strand: Direct

Name: 188527132

Synonym: HPSH_01695

Alternate gene names: NA

Gene position: 325150-326022 (Clockwise)

Preceding gene: 188527131

Following gene: 188527133

Centisome position: 20.21

GC content: 35.85

Gene sequence:

>873_bases
ATGCCAGTAAAAATTTTGTGCGATTGTTTTTTAACAAGCGGTTTAGGGCATGTGAGGCGTTGTGAAAAAATCCTTTCTTT
TATAGAAAAATTAGGGGTTAAAGCGGATCTTTATTTATATAAGCAAAATGATATAAGCGCTTTTTTAGAGAGCGTTGGCA
ATGATGATTTTTTGATTATAGATAGCTATTGTTTAAATTCAAAGGATTTTTATCTTTTAAAAGAAAAAGCCAAAAGCCTT
ATGGTCATAGAAGATAAAGAGCATGCTAAGGGGTTTTACCCTAAAAACACCAAGATCATGAATTTCACGCTGAACGCTTT
AAAACACTACCATTATTTATCAAAAGATTATCAGTATTATTTGGGGGTGGGGTTTTACCCTGTTGATATTCGTTTTGTCT
ATGAGCGCCCTATCAATACAGAAAATAAAGAAGTGCTGATCACTCTAGGGGGGAGCGAGAAAAAAACGCTCAAAGAGATA
GTCAAAATTTTAGAAAATAAGGGCATGCATTTGCATATCATTTCGCCCCATATCCCCAAAAATCCTCCCAAAAACACGCA
TTATTACAGCCCTTTAAGCCCTTTGGAGTTCAGTTCTTTGATGAAATTTTGTGCTTGTGCCATTAGCGCTGCAGGCCAAA
CTCTCTATGAATTAGCCCTTTCTCAAACGCCCTCTCTTATCATTCCCATCGCTTCTAATCAAATCATTCAAAGCCAAGAA
TTTGAAAGCTTGGGTATTTTCAAACAAACGAGTTTGAAAACTTTAGCGAAAGATTTTGAAAATTTACAAATTCAAAAAAA
TCAAGCCTGGGCAAAAAACTTGGTCTTTGGGAGTGAGCTAGAGGGCGCCTTAAGGGAGTTTTTAGAAATTTGA

Upstream 100 bases:

>100_bases
ATTCTATCGCTTTAGAATTATCGCCCTTAGAAGTCCAAGATATTGACACTTTAGAAGATTTAGAATTAGCCAAGCTCAAA
TACAGCCGTTTGAAAAACGC

Downstream 100 bases:

>100_bases
AAAAAAATTATTCTTATGGAAATATCCAAGCGATTGATTTTGCGCACTTAAACGATGAAGAAAAGTTGTTGGTTTTAGAG
TTTCGCAACCACCCAAACAC

Product: CMP-N-acetylneuraminic acid synthetase (neuA)

Products: diphosphate; CMP-N-acylneuraminate

Alternate protein names: FlmD Protein; CMP-Sialic Acid Synthetase NeuA; Glycosyltransferase

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MPVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNDISAFLESVGNDDFLIIDSYCLNSKDFYLLKEKAKSL
MVIEDKEHAKGFYPKNTKIMNFTLNALKHYHYLSKDYQYYLGVGFYPVDIRFVYERPINTENKEVLITLGGSEKKTLKEI
VKILENKGMHLHIISPHIPKNPPKNTHYYSPLSPLEFSSLMKFCACAISAAGQTLYELALSQTPSLIIPIASNQIIQSQE
FESLGIFKQTSLKTLAKDFENLQIQKNQAWAKNLVFGSELEGALREFLEI

Sequences:

>Translated_290_residues
MPVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNDISAFLESVGNDDFLIIDSYCLNSKDFYLLKEKAKSL
MVIEDKEHAKGFYPKNTKIMNFTLNALKHYHYLSKDYQYYLGVGFYPVDIRFVYERPINTENKEVLITLGGSEKKTLKEI
VKILENKGMHLHIISPHIPKNPPKNTHYYSPLSPLEFSSLMKFCACAISAAGQTLYELALSQTPSLIIPIASNQIIQSQE
FESLGIFKQTSLKTLAKDFENLQIQKNQAWAKNLVFGSELEGALREFLEI
>Mature_289_residues
PVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNDISAFLESVGNDDFLIIDSYCLNSKDFYLLKEKAKSLM
VIEDKEHAKGFYPKNTKIMNFTLNALKHYHYLSKDYQYYLGVGFYPVDIRFVYERPINTENKEVLITLGGSEKKTLKEIV
KILENKGMHLHIISPHIPKNPPKNTHYYSPLSPLEFSSLMKFCACAISAAGQTLYELALSQTPSLIIPIASNQIIQSQEF
ESLGIFKQTSLKTLAKDFENLQIQKNQAWAKNLVFGSELEGALREFLEI

Specific function: Unknown

COG id: COG3980

COG function: function code M; Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.43

Molecular weight: Translated: 33140; Mature: 33009

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNDISAFLESVGNDDFLII
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEE
DSYCLNSKDFYLLKEKAKSLMVIEDKEHAKGFYPKNTKIMNFTLNALKHYHYLSKDYQYY
EEEECCCCCEEEEECCCCCEEEEECHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEE
LGVGFYPVDIRFVYERPINTENKEVLITLGGSEKKTLKEIVKILENKGMHLHIISPHIPK
EECCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
NPPKNTHYYSPLSPLEFSSLMKFCACAISAAGQTLYELALSQTPSLIIPIASNQIIQSQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCC
FESLGIFKQTSLKTLAKDFENLQIQKNQAWAKNLVFGSELEGALREFLEI
HHHCCCHHHHHHHHHHHHHHHCEEECCHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
PVKILCDCFLTSGLGHVRRCEKILSFIEKLGVKADLYLYKQNDISAFLESVGNDDFLII
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCEEEE
DSYCLNSKDFYLLKEKAKSLMVIEDKEHAKGFYPKNTKIMNFTLNALKHYHYLSKDYQYY
EEEECCCCCEEEEECCCCCEEEEECHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCEEE
LGVGFYPVDIRFVYERPINTENKEVLITLGGSEKKTLKEIVKILENKGMHLHIISPHIPK
EECCEEEEEEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
NPPKNTHYYSPLSPLEFSSLMKFCACAISAAGQTLYELALSQTPSLIIPIASNQIIQSQE
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCC
FESLGIFKQTSLKTLAKDFENLQIQKNQAWAKNLVFGSELEGALREFLEI
HHHCCCHHHHHHHHHHHHHHHCEEECCHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CTP; N-acylneuraminate

Specific reaction: CTP + N-acylneuraminate = diphosphate + CMP-N-acylneuraminate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA