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The map label for this gene is fdx [H]

Identifier: 188527083

GI number: 188527083

Start: 269980

End: 270234

Strand: Direct

Name: fdx [H]

Synonym: HPSH_01440

Alternate gene names: 188527083

Gene position: 269980-270234 (Clockwise)

Preceding gene: 188527082

Following gene: 188527084

Centisome position: 16.78

GC content: 42.35

Gene sequence:

>255_bases
ATGTCATTATTGGTGAATGATGAATGCATTGCGTGCGATGCTTGCAGAGAAGAATGCCCTAGTGAGGCGATTGAAGAGGG
CGATCCCATTTATAATATTGATCCAGACAGATGCACAGAGTGTTACGGGTATGATGATGATGAACCTCGTTGCGTGAGCG
TATGCCCTGTAGATGCGATTTTACCGGATCCTAACAATGCAGAGAGCAAAGAGGAATTGAAATACAAATACGAAAGCTTA
AAAGAGCAAGATTAA

Upstream 100 bases:

>100_bases
TCCCCCATTCTCAAAATCAAAAAAAAATAGTTTTTTTAGATTGAATTTTAAGCTAATTTAGAGTAAAAATCGTATTCAAA
CTTTTTAAAAGGAGTTAGTC

Downstream 100 bases:

>100_bases
AGGCTAGCAATGGCTAAAATCACAACCGTGATTGATATAGGATCCAATTCGGTGCGTTTGGCTATCTTTAAAAAGACGAG
CCAGTTTGGGTTTTACTTGC

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESL
KEQD

Sequences:

>Translated_84_residues
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESL
KEQD
>Mature_83_residues
SLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVDAILPDPNNAESKEELKYKYESLK
EQD

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=85, Percent_Identity=44.7058823529412, Blast_Score=76, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9514; Mature: 9383

Theoretical pI: Translated: 3.66; Mature: 3.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
9.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVDAI
CCEECCCCEEECHHHHHCCCHHHHHCCCCCEECCHHHHHHCCCCCCCCCCEEEECCCCCC
LPDPNNAESKEELKYKYESLKEQD
CCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLLVNDECIACDACREECPSEAIEEGDPIYNIDPDRCTECYGYDDDEPRCVSVCPVDAI
CEECCCCEEECHHHHHCCCHHHHHCCCCCEECCHHHHHHCCCCCCCCCCEEEECCCCCC
LPDPNNAESKEELKYKYESLKEQD
CCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]