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The map label for this gene is pyrC' [H]

Identifier: 188527072

GI number: 188527072

Start: 260934

End: 262070

Strand: Direct

Name: pyrC' [H]

Synonym: HPSH_01385

Alternate gene names: 188527072

Gene position: 260934-262070 (Clockwise)

Preceding gene: 188527071

Following gene: 188527073

Centisome position: 16.22

GC content: 38.17

Gene sequence:

>1137_bases
ATGCTGTTAAAAAACGCTTCGTTTTATGATGGTGAGGTTTTAAAAAGAGCGGATATTCGCTTAAAAGATTCTCTCATCGC
AGAGATTAAAGAAAACTTAAGCCCTATTAAAAATGAAGAAGTAATTGAGTGCGCGAATTTATTCGTGTTGCCAAGCTTCA
TTGATTTGAGCGTTATTGGTTTGGAGGGTTATGAAAATTTAAAACAAAAGGCTTTTAAAGGGGGGGTAGGGCTACTCAAT
GTTTTTAATTGCGATCAAAGCGGCATTAAAAATATCATGGCGGTTAAAAACAACCAACTAGCCGACATCGCTACGCTTAA
AAACAAAGGAGGGGAAATTTTAATCGTGCAATCTGACGCTTTTTTAGAACTCATCAGCCATTACGCCAAATCCTACAACT
TACCCCTTTTAATCTCTTTGGAAAATTCTTTTGAAGCCCTAAATAGCGGGGCGTTAGCCTATGAATTGGGGCAAAATTTT
GTAGAAAATGCGTTTGAAAACACGCGCTTGGTGCGTTTTATGGAAGTTTCTAGAGCGTTACAGATCCCCATGCTTTTAGA
TAAAGTGAGTAGCGTTGCCACGCTCAAACTCATCAAAGCCTTTAACAATTTAGGAGCGCACCTGCAAGCCCAAACGCCCT
TAAGCCATTTAATCTTAGATGAGAGCGTGTATGAAGATTATGAGCCCAGATTTAAAATCGCCCCTCCTTTAAGGGATAAA
GAAAGCCAAAACGCCCTAAAAGAGGCCCTAAAGAATGATGAAATTACCATGCTCACAAGCCTCCATGTTTTTAAAAATTC
TAACGCAGAGCTTTTTGAAGAAAGCGCTTTTGGGTGTGAGAGCATAGAGGACGCTTTTAGCGTGTCTTATACTTTTTTAG
TTCAAAAAAAGGTTATCAGCTTCCAACAGCTCATTAAAGTCATGGCGACTAATCAAGCGAGATTTTTAAAACTCAATGCA
GGCGAGGTTAAAGAAAATCAATTAGCCAATCTCATGATTGTGGATTTGAACGCTCAAACAAGAGTTATTAATAAAAATTC
GCCCTTTTATGGTTTAGAATTATATGGCGAAGTTCAAAGAATGATCTTAAAAGGGCAAACCACATTGATTAAGGAGAATG
CATGCAAGAAATCATAG

Upstream 100 bases:

>100_bases
TGAAATTGTTTCAGGGTTGGTGCTTATTTTAATGGGGGTGTTGATTGTAACCAACTCTATGGAAAGATTGACGAATTTCT
TGCAAAAATAGGAGGGTTTG

Downstream 100 bases:

>100_bases
GAGCGTCTTTAGTTTTTTTATGCAATGAAAAATGCGAAGTGTTAGAAGATTATGGCGTGGTCTTTGATGAAAAGATTGTT
GAAGTGGGCGATTATAAAAG

Product: dihydroorotase (pyrC)

Products: N-carbamoyl-L-aspartate

Alternate protein names: Aspartate carbamoyltransferase 42 kDa non-catalytic chain [H]

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MLLKNASFYDGEVLKRADIRLKDSLIAEIKENLSPIKNEEVIECANLFVLPSFIDLSVIGLEGYENLKQKAFKGGVGLLN
VFNCDQSGIKNIMAVKNNQLADIATLKNKGGEILIVQSDAFLELISHYAKSYNLPLLISLENSFEALNSGALAYELGQNF
VENAFENTRLVRFMEVSRALQIPMLLDKVSSVATLKLIKAFNNLGAHLQAQTPLSHLILDESVYEDYEPRFKIAPPLRDK
ESQNALKEALKNDEITMLTSLHVFKNSNAELFEESAFGCESIEDAFSVSYTFLVQKKVISFQQLIKVMATNQARFLKLNA
GEVKENQLANLMIVDLNAQTRVINKNSPFYGLELYGEVQRMILKGQTTLIKENACKKS

Sequences:

>Translated_378_residues
MLLKNASFYDGEVLKRADIRLKDSLIAEIKENLSPIKNEEVIECANLFVLPSFIDLSVIGLEGYENLKQKAFKGGVGLLN
VFNCDQSGIKNIMAVKNNQLADIATLKNKGGEILIVQSDAFLELISHYAKSYNLPLLISLENSFEALNSGALAYELGQNF
VENAFENTRLVRFMEVSRALQIPMLLDKVSSVATLKLIKAFNNLGAHLQAQTPLSHLILDESVYEDYEPRFKIAPPLRDK
ESQNALKEALKNDEITMLTSLHVFKNSNAELFEESAFGCESIEDAFSVSYTFLVQKKVISFQQLIKVMATNQARFLKLNA
GEVKENQLANLMIVDLNAQTRVINKNSPFYGLELYGEVQRMILKGQTTLIKENACKKS
>Mature_378_residues
MLLKNASFYDGEVLKRADIRLKDSLIAEIKENLSPIKNEEVIECANLFVLPSFIDLSVIGLEGYENLKQKAFKGGVGLLN
VFNCDQSGIKNIMAVKNNQLADIATLKNKGGEILIVQSDAFLELISHYAKSYNLPLLISLENSFEALNSGALAYELGQNF
VENAFENTRLVRFMEVSRALQIPMLLDKVSSVATLKLIKAFNNLGAHLQAQTPLSHLILDESVYEDYEPRFKIAPPLRDK
ESQNALKEALKNDEITMLTSLHVFKNSNAELFEESAFGCESIEDAFSVSYTFLVQKKVISFQQLIKVMATNQARFLKLNA
GEVKENQLANLMIVDLNAQTRVINKNSPFYGLELYGEVQRMILKGQTTLIKENACKKS

Specific function: Non-functional DHOase [H]

COG id: COG0044

COG function: function code F; Dihydroorotase and related cyclic amidohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHOase family. PyrC' subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059 [H]

Pfam domain/function: PF01979 Amidohydro_1 [H]

EC number: 3.5.2.3

Molecular weight: Translated: 42328; Mature: 42328

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKNASFYDGEVLKRADIRLKDSLIAEIKENLSPIKNEEVIECANLFVLPSFIDLSVIG
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCHHCEEEEE
LEGYENLKQKAFKGGVGLLNVFNCDQSGIKNIMAVKNNQLADIATLKNKGGEILIVQSDA
CCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHH
FLELISHYAKSYNLPLLISLENSFEALNSGALAYELGQNFVENAFENTRLVRFMEVSRAL
HHHHHHHHHHHCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QIPMLLDKVSSVATLKLIKAFNNLGAHLQAQTPLSHLILDESVYEDYEPRFKIAPPLRDK
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCC
ESQNALKEALKNDEITMLTSLHVFKNSNAELFEESAFGCESIEDAFSVSYTFLVQKKVIS
HHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FQQLIKVMATNQARFLKLNAGEVKENQLANLMIVDLNAQTRVINKNSPFYGLELYGEVQR
HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEHHHHHHHHH
MILKGQTTLIKENACKKS
HHHCCCHHEEECCCCCCC
>Mature Secondary Structure
MLLKNASFYDGEVLKRADIRLKDSLIAEIKENLSPIKNEEVIECANLFVLPSFIDLSVIG
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHEEECCHHCEEEEE
LEGYENLKQKAFKGGVGLLNVFNCDQSGIKNIMAVKNNQLADIATLKNKGGEILIVQSDA
CCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECHH
FLELISHYAKSYNLPLLISLENSFEALNSGALAYELGQNFVENAFENTRLVRFMEVSRAL
HHHHHHHHHHHCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
QIPMLLDKVSSVATLKLIKAFNNLGAHLQAQTPLSHLILDESVYEDYEPRFKIAPPLRDK
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCCCCCEEECCCCCCC
ESQNALKEALKNDEITMLTSLHVFKNSNAELFEESAFGCESIEDAFSVSYTFLVQKKVIS
HHHHHHHHHHCCCCEEEEEEEEEEECCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
FQQLIKVMATNQARFLKLNAGEVKENQLANLMIVDLNAQTRVINKNSPFYGLELYGEVQR
HHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCEEEEECCCCEEEHHHHHHHHH
MILKGQTTLIKENACKKS
HHHCCCHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-dihydroorotate; H2O

Specific reaction: (S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]