Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527056

Identifier: 188527056

GI number: 188527056

Start: 242929

End: 243468

Strand: Direct

Name: 188527056

Synonym: HPSH_01295

Alternate gene names: NA

Gene position: 242929-243468 (Clockwise)

Preceding gene: 188527055

Following gene: 188527059

Centisome position: 15.1

GC content: 36.3

Gene sequence:

>540_bases
ATGGCATCTCTTGCCTTTATCCAAGCTTTTTTGGAGTCTTTTAAGGGCTTTTTAAGCCAAGCGACTTTAATTAGCGTTTT
AATAGCGAGCGTTTTAATCCTTTTTTGCGCGATTTTGCTCCTTTTGGCTTTGCTTTTAAGAAACCGCTTGGCTAGCTATA
TAACGGTAGCGGCTTTTTTGGGTGCGTTTTTAAGCATGCCTTTTGTTTTGAATGTTTTACTCACTCAAACGATTTACCCC
ATAGAAACACGCATCTTACACGCTAACCCTTTAAGCTATAGCAACGCTTTTTCTTTGCAAGTGGGAGTCAAAAACAATTC
CAAATTCAGTTTAAACAAATGCGTTTTACGCCTAGAAGTGCTTAAAAACCCTCACAATTTTGTAGAAGAGCATGCGTTTA
AATTGTTTGTCAAAAAAAGCTATGAAAAAACCTTTAAAGAAAAGATTTTGCCTGAAGAATCCAAGGTCTTTTCATTCTTC
ATTGACAACTACCCTTATTTAAAAACAGCCCCCTATCAAGTTTCTTTGTTTTGTTTGTAG

Upstream 100 bases:

>100_bases
AATCATGCTCACTCCAGGTGGGGCTGTGCCTAATATTTGGATTGACACTAAAAGTAAGGTTAAATCTAGTATTGCCGAGA
GTAAAGAGCCTTAAAAACGC

Downstream 100 bases:

>100_bases
AAAAGATAACACCCATTAAAAAGCGGTTAAAAACGCTTAAAGGCATGAATTTTAAATAAAGCTTTAAAGCCTAGATTCCA
ACAAACGCTTCGTATAAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MASLAFIQAFLESFKGFLSQATLISVLIASVLILFCAILLLLALLLRNRLASYITVAAFLGAFLSMPFVLNVLLTQTIYP
IETRILHANPLSYSNAFSLQVGVKNNSKFSLNKCVLRLEVLKNPHNFVEEHAFKLFVKKSYEKTFKEKILPEESKVFSFF
IDNYPYLKTAPYQVSLFCL

Sequences:

>Translated_179_residues
MASLAFIQAFLESFKGFLSQATLISVLIASVLILFCAILLLLALLLRNRLASYITVAAFLGAFLSMPFVLNVLLTQTIYP
IETRILHANPLSYSNAFSLQVGVKNNSKFSLNKCVLRLEVLKNPHNFVEEHAFKLFVKKSYEKTFKEKILPEESKVFSFF
IDNYPYLKTAPYQVSLFCL
>Mature_178_residues
ASLAFIQAFLESFKGFLSQATLISVLIASVLILFCAILLLLALLLRNRLASYITVAAFLGAFLSMPFVLNVLLTQTIYPI
ETRILHANPLSYSNAFSLQVGVKNNSKFSLNKCVLRLEVLKNPHNFVEEHAFKLFVKKSYEKTFKEKILPEESKVFSFFI
DNYPYLKTAPYQVSLFCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20315; Mature: 20184

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLAFIQAFLESFKGFLSQATLISVLIASVLILFCAILLLLALLLRNRLASYITVAAFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFLSMPFVLNVLLTQTIYPIETRILHANPLSYSNAFSLQVGVKNNSKFSLNKCVLRLEV
HHHHHHHHHHHHHHHHHHCHHHHEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
LKNPHNFVEEHAFKLFVKKSYEKTFKEKILPEESKVFSFFIDNYPYLKTAPYQVSLFCL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
ASLAFIQAFLESFKGFLSQATLISVLIASVLILFCAILLLLALLLRNRLASYITVAAFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAFLSMPFVLNVLLTQTIYPIETRILHANPLSYSNAFSLQVGVKNNSKFSLNKCVLRLEV
HHHHHHHHHHHHHHHHHHCHHHHEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
LKNPHNFVEEHAFKLFVKKSYEKTFKEKILPEESKVFSFFIDNYPYLKTAPYQVSLFCL
HHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA