| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is cshA [H]
Identifier: 188527054
GI number: 188527054
Start: 240335
End: 241813
Strand: Direct
Name: cshA [H]
Synonym: HPSH_01285
Alternate gene names: 188527054
Gene position: 240335-241813 (Clockwise)
Preceding gene: 188527041
Following gene: 188527055
Centisome position: 14.94
GC content: 43.07
Gene sequence:
>1479_bases ATGGAATTTAACCAACCACCACTCCCTACAGAAATTGATGATGACGCTTATCATAAGCCGAGTTTTAATGATTTGGGCCT AAAAGAATCGGTTTTAAAATCCGTTTATGAAGCCGGTTTCACTTCCCCAAGCCCCATTCAAGAAAAGGCCATTCCGGCTG TTTTGCAAGGCCGAGATGTCATCGCGCAAGCCCAAACAGGCACAGGAAAAACCGCCGCTTTCGCTCTGCCCATTATCAAC AACCTTAAAAACAACCACACCATAGAGGCCTTAGTGATCACGCCCACTAGAGAATTAGCCATGCAAATTAGCGATGAGAT TTTCAAATTGGGCAAACACACCAGGACTAAAACCGTGTGCGTGTATGGAGGCCAGAGCGTTAAAAAGCAATGCGAATTTA TTAAGAAAAACCCCCAAGTGATGATCGCTACACCAGGAAGGTTGCTAGATCATTTAAAAAACGAACGCATCCATAAATTT GTGCCTAAAGTGGTCGTTTTGGATGAAAGCGATGAAATGCTGGATATGGGGTTTTTAGACGATATTGAAGAGATTTTTGA CTACCTCCCTAGCGAAGCGCAGATTTTGCTTTTTTCAGCCACGATGCCAGAGCCGATTAAAAGACTAGCGGATAAGATTT TAGAAAACCCTATTAAAATCCATATCGCCCCCTCTAATATCACTAACACCGACATCACCCAACGCTTTTATGTGATCAAT GAGCATGAGAGGGCTGAAGCGATCATGCGCCTTTTAGACACCCAAGCGCCCAAAAAAAGCATTGTTTTCACGCGCACCAA AAAAGAAGCCGATGAATTGCACCAATTCCTTGCTTCTAAAAATTACAAAAGCACCGCCTTGCATGGGGATATGGATCAAA GGGATCGGCGCGCTTCTATCATGGCGTTTAAAAAAAATGACGCTGATGTGTTGGTGGCTACAGATGTGGCGAGCCGTGGG TTGGATATTAGCGGTGTAAGCCATGTGTTCAATTACCACTTGCCCCTAAATACCGAGAGCTATATCCATCGCATCGGGAG AACCGGGCGCGCGGGCAAAAAAGGCATGGCGATCACTTTAGTAACCCCCTTAGAATACAAAGAGCTTTTACGCATGCAAA AAGAAATTGATTCAAAAATTGAACTTTTTGAAATCCCCACCATTAACGAAAATCAGATCATCAAAACCTTGCATGACGCT AAAGTGTCTGAAGGGATCATCAGCCTTTATGAACAGCTTACCGAAATTTTTGAGCCGTCTCAATTGGTTTTAAAGCTTTT GAGTTTGCAGTTTGAAACCAGCAAAATTGGCTTAAACCAGCAAGAAATTGATGCGATTCAAAACCCTAAAGAAAAAACGC CAAAACCCTCTAACAAAAAAACGCACCAGCATGAGCAAGCGCGTTCTTTTAAAAAGGGTCAGCACAAAGACAGACACCCT AAAACAAACCACCATTCTAAAAAACCCAAACGCCGTTAA
Upstream 100 bases:
>100_bases TATACTCAAAAATCTTATAAACTTTAAATCAAAGATTTTAATTTTAGCCTTTTATTAGCTTTTTATAAAGTTTCAAATTA AATTGAGGTATGAATCTCCC
Downstream 100 bases:
>100_bases AATATTTAAAAAGGAAATCCATGCCCATTGATTTGAACGAACATTTAAAAAAGAAAAATTCTCAAAGAGAAACCCCCACG CCTAATACGCCTAATAATGG
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSKIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEQARSFKKGQHKDRHP KTNHHSKKPKRR
Sequences:
>Translated_492_residues MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSKIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEQARSFKKGQHKDRHP KTNHHSKKPKRR >Mature_492_residues MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDVIAQAQTGTGKTAAFALPIIN NLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVCVYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKF VPKVVVLDESDEMLDMGFLDDIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASIMAFKKNDADVLVATDVASRG LDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITLVTPLEYKELLRMQKEIDSKIELFEIPTINENQIIKTLHDA KVSEGIISLYEQLTEIFEPSQLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEQARSFKKGQHKDRHP KTNHHSKKPKRR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=38.0813953488372, Blast_Score=272, Evalue=4e-73, Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=38.4196185286104, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=38.4196185286104, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=38.4196185286104, Blast_Score=259, Evalue=5e-69, Organism=Homo sapiens, GI20149629, Length=378, Percent_Identity=37.037037037037, Blast_Score=255, Evalue=6e-68, Organism=Homo sapiens, GI169881239, Length=367, Percent_Identity=37.6021798365123, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI13514809, Length=367, Percent_Identity=37.6021798365123, Blast_Score=254, Evalue=2e-67, Organism=Homo sapiens, GI224593278, Length=368, Percent_Identity=39.6739130434783, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=37.0786516853933, Blast_Score=253, Evalue=3e-67, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=38.0952380952381, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI41327773, Length=352, Percent_Identity=38.6363636363636, Blast_Score=252, Evalue=5e-67, Organism=Homo sapiens, GI45446747, Length=351, Percent_Identity=38.1766381766382, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI45446743, Length=351, Percent_Identity=38.1766381766382, Blast_Score=251, Evalue=7e-67, Organism=Homo sapiens, GI222352149, Length=370, Percent_Identity=38.3783783783784, Blast_Score=248, Evalue=8e-66, Organism=Homo sapiens, GI83700235, Length=374, Percent_Identity=40.1069518716578, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=38.6486486486486, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI262118318, Length=355, Percent_Identity=37.1830985915493, Blast_Score=245, Evalue=7e-65, Organism=Homo sapiens, GI31542656, Length=481, Percent_Identity=33.8877338877339, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI216548263, Length=355, Percent_Identity=37.1830985915493, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI262231852, Length=355, Percent_Identity=37.1830985915493, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI13518015, Length=355, Percent_Identity=37.1830985915493, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI148613856, Length=381, Percent_Identity=35.6955380577428, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI38201710, Length=381, Percent_Identity=35.6955380577428, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI4758138, Length=359, Percent_Identity=36.4902506963788, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI51094101, Length=356, Percent_Identity=35.6741573033708, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI164419743, Length=356, Percent_Identity=35.9550561797753, Blast_Score=234, Evalue=2e-61, Organism=Homo sapiens, GI21040371, Length=350, Percent_Identity=36, Blast_Score=232, Evalue=6e-61, Organism=Homo sapiens, GI4758112, Length=350, Percent_Identity=34.8571428571429, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI18375623, Length=350, Percent_Identity=34.8571428571429, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI55749865, Length=378, Percent_Identity=34.6560846560847, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI50659095, Length=393, Percent_Identity=36.6412213740458, Blast_Score=225, Evalue=7e-59, Organism=Homo sapiens, GI41327776, Length=378, Percent_Identity=35.7142857142857, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=34.4173441734417, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI188035877, Length=345, Percent_Identity=36.231884057971, Blast_Score=222, Evalue=5e-58, Organism=Homo sapiens, GI13129006, Length=384, Percent_Identity=34.1145833333333, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI13514831, Length=354, Percent_Identity=35.0282485875706, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI6005743, Length=392, Percent_Identity=34.4387755102041, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI8922886, Length=392, Percent_Identity=34.1836734693878, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=33.4254143646409, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI38327634, Length=394, Percent_Identity=32.48730964467, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI256223453, Length=380, Percent_Identity=31.5789473684211, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=30.0518134715026, Blast_Score=187, Evalue=3e-47, Organism=Homo sapiens, GI38569505, Length=351, Percent_Identity=34.4729344729345, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI38569503, Length=351, Percent_Identity=34.4729344729345, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI62241022, Length=370, Percent_Identity=34.0540540540541, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI41327779, Length=358, Percent_Identity=32.122905027933, Blast_Score=183, Evalue=4e-46, Organism=Homo sapiens, GI17505907, Length=421, Percent_Identity=30.4038004750594, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI62241024, Length=349, Percent_Identity=33.2378223495702, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI256773275, Length=386, Percent_Identity=30.0518134715026, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI9966805, Length=338, Percent_Identity=30.1775147928994, Blast_Score=141, Evalue=1e-33, Organism=Homo sapiens, GI4826686, Length=333, Percent_Identity=27.6276276276276, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI20336298, Length=229, Percent_Identity=33.6244541484716, Blast_Score=132, Evalue=9e-31, Organism=Homo sapiens, GI154759257, Length=414, Percent_Identity=26.3285024154589, Blast_Score=124, Evalue=3e-28, Organism=Escherichia coli, GI87082221, Length=373, Percent_Identity=41.8230563002681, Blast_Score=313, Evalue=2e-86, Organism=Escherichia coli, GI1787016, Length=383, Percent_Identity=41.5143603133159, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI1787605, Length=338, Percent_Identity=39.3491124260355, Blast_Score=260, Evalue=1e-70, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=39.2045454545455, Blast_Score=248, Evalue=5e-67, Organism=Escherichia coli, GI1788930, Length=355, Percent_Identity=40, Blast_Score=245, Evalue=5e-66, Organism=Escherichia coli, GI48994977, Length=349, Percent_Identity=24.0687679083095, Blast_Score=90, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=39.2441860465116, Blast_Score=280, Evalue=9e-76, Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=38.953488372093, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI71987143, Length=368, Percent_Identity=37.2282608695652, Blast_Score=265, Evalue=4e-71, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=39.4179894179894, Blast_Score=265, Evalue=5e-71, Organism=Caenorhabditis elegans, GI17507945, Length=358, Percent_Identity=37.9888268156425, Blast_Score=251, Evalue=6e-67, Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=38.5826771653543, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17555296, Length=376, Percent_Identity=33.7765957446808, Blast_Score=245, Evalue=3e-65, Organism=Caenorhabditis elegans, GI86570094, Length=353, Percent_Identity=39.3767705382436, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI17510307, Length=377, Percent_Identity=37.1352785145889, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17510309, Length=377, Percent_Identity=37.1352785145889, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995514, Length=377, Percent_Identity=37.1352785145889, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI71995718, Length=379, Percent_Identity=36.9393139841689, Blast_Score=242, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17552642, Length=383, Percent_Identity=36.2924281984334, Blast_Score=234, Evalue=6e-62, Organism=Caenorhabditis elegans, GI71999646, Length=358, Percent_Identity=33.7988826815642, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI71999644, Length=358, Percent_Identity=33.7988826815642, Blast_Score=234, Evalue=1e-61, Organism=Caenorhabditis elegans, GI115533224, Length=372, Percent_Identity=35.752688172043, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI71982858, Length=350, Percent_Identity=33.7142857142857, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17552114, Length=361, Percent_Identity=32.9639889196676, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI17537549, Length=355, Percent_Identity=36.3380281690141, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=36.7567567567568, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=36.2162162162162, Blast_Score=218, Evalue=7e-57, Organism=Caenorhabditis elegans, GI115532548, Length=390, Percent_Identity=32.8205128205128, Blast_Score=213, Evalue=1e-55, Organism=Caenorhabditis elegans, GI115532546, Length=386, Percent_Identity=33.160621761658, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.4054054054054, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI17509811, Length=436, Percent_Identity=31.8807339449541, Blast_Score=203, Evalue=2e-52, Organism=Caenorhabditis elegans, GI17536099, Length=374, Percent_Identity=35.0267379679144, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536101, Length=374, Percent_Identity=35.0267379679144, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17505370, Length=431, Percent_Identity=30.6264501160093, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=35.0267379679144, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17553716, Length=364, Percent_Identity=29.3956043956044, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507641, Length=386, Percent_Identity=31.6062176165803, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17508543, Length=367, Percent_Identity=31.0626702997275, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=30.6590257879656, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI32564046, Length=373, Percent_Identity=31.6353887399464, Blast_Score=171, Evalue=6e-43, Organism=Caenorhabditis elegans, GI193208216, Length=386, Percent_Identity=30.0518134715026, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI25148203, Length=429, Percent_Identity=26.8065268065268, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17556951, Length=379, Percent_Identity=28.2321899736148, Blast_Score=148, Evalue=6e-36, Organism=Caenorhabditis elegans, GI71990816, Length=351, Percent_Identity=29.6296296296296, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI71982862, Length=205, Percent_Identity=31.7073170731707, Blast_Score=124, Evalue=1e-28, Organism=Caenorhabditis elegans, GI25148291, Length=363, Percent_Identity=27.2727272727273, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71997889, Length=363, Percent_Identity=25.068870523416, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI25148205, Length=333, Percent_Identity=24.9249249249249, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71987152, Length=110, Percent_Identity=41.8181818181818, Blast_Score=95, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321856, Length=391, Percent_Identity=37.8516624040921, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6324217, Length=352, Percent_Identity=37.5, Blast_Score=264, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6325138, Length=380, Percent_Identity=38.4210526315789, Blast_Score=262, Evalue=9e-71, Organism=Saccharomyces cerevisiae, GI6320224, Length=368, Percent_Identity=36.6847826086957, Blast_Score=255, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6324778, Length=350, Percent_Identity=39.1428571428571, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=356, Percent_Identity=41.0112359550562, Blast_Score=249, Evalue=7e-67, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=38.9204545454545, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6320041, Length=361, Percent_Identity=34.0720221606648, Blast_Score=234, Evalue=2e-62, Organism=Saccharomyces cerevisiae, GI6322912, Length=369, Percent_Identity=36.3143631436314, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6322323, Length=369, Percent_Identity=36.3143631436314, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=374, Percent_Identity=33.9572192513369, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6324620, Length=394, Percent_Identity=35.0253807106599, Blast_Score=223, Evalue=7e-59, Organism=Saccharomyces cerevisiae, GI6320173, Length=425, Percent_Identity=30.8235294117647, Blast_Score=215, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=374, Percent_Identity=33.6898395721925, Blast_Score=206, Evalue=7e-54, Organism=Saccharomyces cerevisiae, GI6323947, Length=386, Percent_Identity=35.2331606217617, Blast_Score=203, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6322427, Length=366, Percent_Identity=34.1530054644809, Blast_Score=197, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.952380952381, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=34.3406593406593, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6319618, Length=425, Percent_Identity=31.5294117647059, Blast_Score=186, Evalue=9e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=350, Percent_Identity=31.7142857142857, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320400, Length=422, Percent_Identity=31.7535545023697, Blast_Score=169, Evalue=8e-43, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=33.6927223719677, Blast_Score=163, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=27.8301886792453, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322876, Length=436, Percent_Identity=28.4403669724771, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=415, Percent_Identity=23.3734939759036, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=406, Percent_Identity=25.1231527093596, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6323844, Length=356, Percent_Identity=22.4719101123595, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24584399, Length=350, Percent_Identity=41.4285714285714, Blast_Score=271, Evalue=1e-72, Organism=Drosophila melanogaster, GI24645031, Length=354, Percent_Identity=38.4180790960452, Blast_Score=268, Evalue=9e-72, Organism=Drosophila melanogaster, GI24662330, Length=350, Percent_Identity=40, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=36.9146005509642, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24585582, Length=377, Percent_Identity=37.6657824933687, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=37.3937677053824, Blast_Score=254, Evalue=8e-68, Organism=Drosophila melanogaster, GI24582080, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24582078, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI17136248, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24582075, Length=359, Percent_Identity=38.1615598885794, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI24584994, Length=377, Percent_Identity=37.4005305039788, Blast_Score=253, Evalue=2e-67, Organism=Drosophila melanogaster, GI21356161, Length=375, Percent_Identity=38.6666666666667, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI17977678, Length=356, Percent_Identity=35.3932584269663, Blast_Score=248, Evalue=8e-66, Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=37.3297002724796, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24644479, Length=353, Percent_Identity=36.2606232294618, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644487, Length=353, Percent_Identity=36.2606232294618, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI45551833, Length=353, Percent_Identity=36.2606232294618, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI24644485, Length=353, Percent_Identity=36.2606232294618, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI281361218, Length=353, Percent_Identity=36.2606232294618, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644481, Length=353, Percent_Identity=36.2606232294618, Blast_Score=244, Evalue=8e-65, Organism=Drosophila melanogaster, GI24644483, Length=353, Percent_Identity=36.2606232294618, Blast_Score=244, Evalue=9e-65, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=36.986301369863, Blast_Score=243, Evalue=3e-64, Organism=Drosophila melanogaster, GI21355075, Length=363, Percent_Identity=37.1900826446281, Blast_Score=236, Evalue=2e-62, Organism=Drosophila melanogaster, GI24583281, Length=361, Percent_Identity=34.3490304709141, Blast_Score=233, Evalue=3e-61, Organism=Drosophila melanogaster, GI24583279, Length=361, Percent_Identity=34.3490304709141, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI24581954, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581952, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24581956, Length=351, Percent_Identity=34.1880341880342, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI17136814, Length=371, Percent_Identity=36.9272237196765, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI28575014, Length=356, Percent_Identity=33.9887640449438, Blast_Score=216, Evalue=4e-56, Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=34.7826086956522, Blast_Score=212, Evalue=5e-55, Organism=Drosophila melanogaster, GI28571808, Length=379, Percent_Identity=33.509234828496, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI28571809, Length=379, Percent_Identity=33.509234828496, Blast_Score=193, Evalue=2e-49, Organism=Drosophila melanogaster, GI24642822, Length=399, Percent_Identity=32.5814536340852, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI21355559, Length=388, Percent_Identity=33.2474226804124, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24666101, Length=338, Percent_Identity=34.0236686390533, Blast_Score=178, Evalue=7e-45, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=29.8153034300792, Blast_Score=169, Evalue=5e-42, Organism=Drosophila melanogaster, GI24643725, Length=385, Percent_Identity=28.051948051948, Blast_Score=163, Evalue=2e-40, Organism=Drosophila melanogaster, GI18859659, Length=420, Percent_Identity=29.5238095238095, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI28571338, Length=420, Percent_Identity=29.5238095238095, Blast_Score=162, Evalue=6e-40, Organism=Drosophila melanogaster, GI19920478, Length=367, Percent_Identity=31.0626702997275, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI20130173, Length=336, Percent_Identity=27.6785714285714, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI24640164, Length=346, Percent_Identity=25.7225433526012, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24668515, Length=329, Percent_Identity=25.8358662613982, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI17136666, Length=393, Percent_Identity=27.735368956743, Blast_Score=130, Evalue=3e-30, Organism=Drosophila melanogaster, GI24646066, Length=411, Percent_Identity=24.5742092457421, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 55840; Mature: 55840
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCHH IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC EEECCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD EECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEEEEEEC EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI CHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCEE MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL EEEECCCCCEEEEECHHHCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEE VTPLEYKELLRMQKEIDSKIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS ECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEQARSFKKGQHKDRHP HHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC KTNHHSKKPKRR CCCCCCCCCCCC >Mature Secondary Structure MEFNQPPLPTEIDDDAYHKPSFNDLGLKESVLKSVYEAGFTSPSPIQEKAIPAVLQGRDV CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCHHHHCCCHH IAQAQTGTGKTAAFALPIINNLKNNHTIEALVITPTRELAMQISDEIFKLGKHTRTKTVC EEECCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCEEE VYGGQSVKKQCEFIKKNPQVMIATPGRLLDHLKNERIHKFVPKVVVLDESDEMLDMGFLD EECCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHH DIEEIFDYLPSEAQILLFSATMPEPIKRLADKILENPIKIHIAPSNITNTDITQRFYVIN HHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCHHEEEEEEC EHERAEAIMRLLDTQAPKKSIVFTRTKKEADELHQFLASKNYKSTALHGDMDQRDRRASI CHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCEE MAFKKNDADVLVATDVASRGLDISGVSHVFNYHLPLNTESYIHRIGRTGRAGKKGMAITL EEEECCCCCEEEEECHHHCCCCCCCHHHHHEECCCCCCHHHHHHHCCCCCCCCCCCEEEE VTPLEYKELLRMQKEIDSKIELFEIPTINENQIIKTLHDAKVSEGIISLYEQLTEIFEPS ECCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLVLKLLSLQFETSKIGLNQQEIDAIQNPKEKTPKPSNKKTHQHEQARSFKKGQHKDRHP HHHHHHHHHHCCHHHCCCCHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCC KTNHHSKKPKRR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA