| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is mglB [H]
Identifier: 187935778
GI number: 187935778
Start: 2628288
End: 2629346
Strand: Reverse
Name: mglB [H]
Synonym: CLL_A2524
Alternate gene names: 187935778
Gene position: 2629346-2628288 (Counterclockwise)
Preceding gene: 187932767
Following gene: 187933460
Centisome position: 69.19
GC content: 25.78
Gene sequence:
>1059_bases ATGAAAAAAAAACTTTTAAGTATTAATATGATAATTATAGTAATGATTTTAATGTTTTTTGGTGTTAATGAAAATATTGT AGCTAATTGTTCAAATTTTGATTCAGAAAAAGCTGCTAAAGTAGGAGTATTGTTATATAAATTTAATGATGAGTATATCT CTTTATTAAAAAATAGTTTGGAAGAAATTCAAAAAGAAAATCCAAACAAAGTTGAGTTTATTTTTTTAGATGCTTATGGT GATGAAAAAAAACAAAATAAGGAACTAGATAAATTGTTAAAAGAAAAAGTAGATCTTTTATTAGTAAACTTAGTTGATAC AAGTGAAGGATCAACACAAAAAGTAGTGGATAGAATTAAAGAAAATAATGTTCCAGTAATATTTTTTAATAGGGAACCTA TAAGTAAAATACCAATAAAATCTTATGAGAAAGCTGTTATTTTATCAAGAATACCCGAGGCAGGCATATTACAAGGGCAA ATAGTATCTGACTTATGGAATGATAATAAAAAAATGATAGATAAAAACAAAGATAATATTATGCAATATGTTATGTTAAC TGGTGAAAGTAGTGACTTAACGGCAATTTCTAGAACTAAAAATGTTATTAAAACAATAAAAGACAATGGAATAGAAATTC AAGAATTAGAAAAGAAAAATTCCAAGTGGGATAGAGAATTAGCTAAGCAAAATATAGCATCATTATTATATCAATACGGT AATAAAATTGAAGTTATAATTGCTAATAATGATGCTATGGCAATAGGTGCTATTGAAGCATTGCAAAAGCAAAATTATAA TAACGGAGATTTGAATAATACAATTATTGTTGTAGGAATTGATGCAACACCTAAAGCAAAGGAATTAATAAATGAGGGTT ATATGGCTGGAACAGTTTTTCAAGATCCAAAAGAAGAAGCAGATGCCCTTTATACTTTAGGAATGAATTTAATATCAGGT AAAAATCCAATTGAAAATACACAATATAAGTATGATGAGACAGGAGTTACAGTTCGCCTTCCATATAAAGAATATATTAA TGAAACAAAGTATAAGTAA
Upstream 100 bases:
>100_bases GCTTATTTTTATTCTTATGGATAATTTATTTTCATAATCCAAATAATATTAATAGTAAAAATATTTATGAAATATAAAAT TAGTATAACGGAGGATTACT
Downstream 100 bases:
>100_bases ATCTAAATTTTAATAAGTTTAAAGAATAAAATATTTTTATAAACACATTATAATTAATGAGTGAGGTGAATTTTAATGGA TAACAATAAAAATAGATTAA
Product: D-galactose-binding periplasmic protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: GBP; D-galactose/ D-glucose-binding protein; GGBP [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MKKKLLSINMIIIVMILMFFGVNENIVANCSNFDSEKAAKVGVLLYKFNDEYISLLKNSLEEIQKENPNKVEFIFLDAYG DEKKQNKELDKLLKEKVDLLLVNLVDTSEGSTQKVVDRIKENNVPVIFFNREPISKIPIKSYEKAVILSRIPEAGILQGQ IVSDLWNDNKKMIDKNKDNIMQYVMLTGESSDLTAISRTKNVIKTIKDNGIEIQELEKKNSKWDRELAKQNIASLLYQYG NKIEVIIANNDAMAIGAIEALQKQNYNNGDLNNTIIVVGIDATPKAKELINEGYMAGTVFQDPKEEADALYTLGMNLISG KNPIENTQYKYDETGVTVRLPYKEYINETKYK
Sequences:
>Translated_352_residues MKKKLLSINMIIIVMILMFFGVNENIVANCSNFDSEKAAKVGVLLYKFNDEYISLLKNSLEEIQKENPNKVEFIFLDAYG DEKKQNKELDKLLKEKVDLLLVNLVDTSEGSTQKVVDRIKENNVPVIFFNREPISKIPIKSYEKAVILSRIPEAGILQGQ IVSDLWNDNKKMIDKNKDNIMQYVMLTGESSDLTAISRTKNVIKTIKDNGIEIQELEKKNSKWDRELAKQNIASLLYQYG NKIEVIIANNDAMAIGAIEALQKQNYNNGDLNNTIIVVGIDATPKAKELINEGYMAGTVFQDPKEEADALYTLGMNLISG KNPIENTQYKYDETGVTVRLPYKEYINETKYK >Mature_352_residues MKKKLLSINMIIIVMILMFFGVNENIVANCSNFDSEKAAKVGVLLYKFNDEYISLLKNSLEEIQKENPNKVEFIFLDAYG DEKKQNKELDKLLKEKVDLLLVNLVDTSEGSTQKVVDRIKENNVPVIFFNREPISKIPIKSYEKAVILSRIPEAGILQGQ IVSDLWNDNKKMIDKNKDNIMQYVMLTGESSDLTAISRTKNVIKTIKDNGIEIQELEKKNSKWDRELAKQNIASLLYQYG NKIEVIIANNDAMAIGAIEALQKQNYNNGDLNNTIIVVGIDATPKAKELINEGYMAGTVFQDPKEEADALYTLGMNLISG KNPIENTQYKYDETGVTVRLPYKEYINETKYK
Specific function: This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=344, Percent_Identity=37.5, Blast_Score=211, Evalue=4e-56, Organism=Escherichia coli, GI1790192, Length=299, Percent_Identity=21.7391304347826, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 40012; Mature: 40012
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLLSINMIIIVMILMFFGVNENIVANCSNFDSEKAAKVGVLLYKFNDEYISLLKNSL CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEEEEEEEECHHHHHHHHHHH EEIQKENPNKVEFIFLDAYGDEKKQNKELDKLLKEKVDLLLVNLVDTSEGSTQKVVDRIK HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHH ENNVPVIFFNREPISKIPIKSYEKAVILSRIPEAGILQGQIVSDLWNDNKKMIDKNKDNI HCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCHHHE MQYVMLTGESSDLTAISRTKNVIKTIKDNGIEIQELEKKNSKWDRELAKQNIASLLYQYG EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC NKIEVIIANNDAMAIGAIEALQKQNYNNGDLNNTIIVVGIDATPKAKELINEGYMAGTVF CEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEECCCC QDPKEEADALYTLGMNLISGKNPIENTQYKYDETGVTVRLPYKEYINETKYK CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECHHHHHHHCCCC >Mature Secondary Structure MKKKLLSINMIIIVMILMFFGVNENIVANCSNFDSEKAAKVGVLLYKFNDEYISLLKNSL CCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHEEEEEEEECHHHHHHHHHHH EEIQKENPNKVEFIFLDAYGDEKKQNKELDKLLKEKVDLLLVNLVDTSEGSTQKVVDRIK HHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCHHHHHHHHH ENNVPVIFFNREPISKIPIKSYEKAVILSRIPEAGILQGQIVSDLWNDNKKMIDKNKDNI HCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCHHHE MQYVMLTGESSDLTAISRTKNVIKTIKDNGIEIQELEKKNSKWDRELAKQNIASLLYQYG EEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHC NKIEVIIANNDAMAIGAIEALQKQNYNNGDLNNTIIVVGIDATPKAKELINEGYMAGTVF CEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEECCCC QDPKEEADALYTLGMNLISGKNPIENTQYKYDETGVTVRLPYKEYINETKYK CCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEECHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA