| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935730
Identifier: 187935730
GI number: 187935730
Start: 2611332
End: 2612216
Strand: Reverse
Name: 187935730
Synonym: CLL_A2515
Alternate gene names: NA
Gene position: 2612216-2611332 (Counterclockwise)
Preceding gene: 187934646
Following gene: 187934524
Centisome position: 68.74
GC content: 23.28
Gene sequence:
>885_bases ATGCAGATTGTAAATCAAGCAAGAGTAAATTTTGAATATAAAAAATCGCATAGTTCTCCTATTGTTATTGAAACAGCACT CAGTAATAGAGCATTAACATACATTATATGTCCTAGCCTAAAGATAAAAAAATGTGTTGATAAGTTAAGTGCATCCATAT TTGATATATTAACATATGAATGCACTATTTTTAATACAGGAAATTCATGCATTAGAAAAATAATTTTTAGAGATTTAATA CCTAGAGGCACAAGATTTATATTTAATTCAATGACATTAAATGGGGAAAAGGAAAGGTGTAAAACTCCCAATAAAGGATT GTATATAGAAAAAATAAAGCAAGGGGAATGTGCTACTATAAGTTTTAATGTGTTAATAGTTCCTACTTGTGATATAAAAG AGATAAAAAATTATGCAACTATAAGTTATGATTCTATTTATAATGTTGAAAAACCTCCAATTAGAGTTTGTATAAGAACA AATAAAGTAACTACTAACTTAAAGACTAATTTATTAAAACAAACAGAAGTGAGAAATATAGTGAAAATTCCTGAAAGTTA TAATGCTAAAATTAATATTTATAAAATAGCAACAAAGGTTGAATTATTAAATACAAAAGTAATTAATGGACTAAAAAACA ATAAAGTATTAGTTTTGTGTAAAATTAATTATGAAATTAGTTATAGAAAATGTTCAATAAACTATAAAGTAACTTGGAGT AGTGGATTTTCTAAATTGATTTTTGTTCCAGAAGGAATTAAGTATTATGATAATGATTTATTATTAAAAAATATAAAAGT ATATATAGAAGATTTTAATTGTATTTTATTAAGCACTAATAAGTTGTTTATAGATTCGCAAATATTAATTAAAATAGGCT CTTAG
Upstream 100 bases:
>100_bases AGCCAAAAATTACTATTAAGTGTTACATTTTTAATAGAGTTTAAAGAAGACTTTTTAGATGATAATAATTAAAAGTTTTC ACTAAAAGAAAGGAGTAAAT
Downstream 100 bases:
>100_bases TGTTTACAATGATTAATTCTTTGTATAAGTGAATTTATTGTTAAAAAGAATAAATATATTTAAAATAACACATCCTTATA AAATAAGAATAAATTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: Cell Surface Protein
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS
Sequences:
>Translated_294_residues MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS >Mature_294_residues MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33748; Mature: 33748
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYE CCCCCCHHEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEEE CTIFNTGNSCIRKIIFRDLIPRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATI EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHCCCCCCCEEEEEECCCCEEEE SFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRTNKVTTNLKTNLLKQTEVRNI EEEEEEEECCCHHHHCCEEEEEECCEECCCCCCEEEEEEECEEEECHHHHHHHHHHHHHH VKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS EECCCCCCCEEEEEEEEEEEEEHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEC SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS CCCEEEEEEECCCEEECCCEEEEEEEEEEEECEEEEEECCEEEECCEEEEEECC >Mature Secondary Structure MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYE CCCCCCHHEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEEE CTIFNTGNSCIRKIIFRDLIPRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATI EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHCCCCCCCEEEEEECCCCEEEE SFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRTNKVTTNLKTNLLKQTEVRNI EEEEEEEECCCHHHHCCEEEEEECCEECCCCCCEEEEEEECEEEECHHHHHHHHHHHHHH VKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS EECCCCCCCEEEEEEEEEEEEEHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEC SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS CCCEEEEEEECCCEEECCCEEEEEEEEEEEECEEEEEECCEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA