Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187935730

Identifier: 187935730

GI number: 187935730

Start: 2611332

End: 2612216

Strand: Reverse

Name: 187935730

Synonym: CLL_A2515

Alternate gene names: NA

Gene position: 2612216-2611332 (Counterclockwise)

Preceding gene: 187934646

Following gene: 187934524

Centisome position: 68.74

GC content: 23.28

Gene sequence:

>885_bases
ATGCAGATTGTAAATCAAGCAAGAGTAAATTTTGAATATAAAAAATCGCATAGTTCTCCTATTGTTATTGAAACAGCACT
CAGTAATAGAGCATTAACATACATTATATGTCCTAGCCTAAAGATAAAAAAATGTGTTGATAAGTTAAGTGCATCCATAT
TTGATATATTAACATATGAATGCACTATTTTTAATACAGGAAATTCATGCATTAGAAAAATAATTTTTAGAGATTTAATA
CCTAGAGGCACAAGATTTATATTTAATTCAATGACATTAAATGGGGAAAAGGAAAGGTGTAAAACTCCCAATAAAGGATT
GTATATAGAAAAAATAAAGCAAGGGGAATGTGCTACTATAAGTTTTAATGTGTTAATAGTTCCTACTTGTGATATAAAAG
AGATAAAAAATTATGCAACTATAAGTTATGATTCTATTTATAATGTTGAAAAACCTCCAATTAGAGTTTGTATAAGAACA
AATAAAGTAACTACTAACTTAAAGACTAATTTATTAAAACAAACAGAAGTGAGAAATATAGTGAAAATTCCTGAAAGTTA
TAATGCTAAAATTAATATTTATAAAATAGCAACAAAGGTTGAATTATTAAATACAAAAGTAATTAATGGACTAAAAAACA
ATAAAGTATTAGTTTTGTGTAAAATTAATTATGAAATTAGTTATAGAAAATGTTCAATAAACTATAAAGTAACTTGGAGT
AGTGGATTTTCTAAATTGATTTTTGTTCCAGAAGGAATTAAGTATTATGATAATGATTTATTATTAAAAAATATAAAAGT
ATATATAGAAGATTTTAATTGTATTTTATTAAGCACTAATAAGTTGTTTATAGATTCGCAAATATTAATTAAAATAGGCT
CTTAG

Upstream 100 bases:

>100_bases
AGCCAAAAATTACTATTAAGTGTTACATTTTTAATAGAGTTTAAAGAAGACTTTTTAGATGATAATAATTAAAAGTTTTC
ACTAAAAGAAAGGAGTAAAT

Downstream 100 bases:

>100_bases
TGTTTACAATGATTAATTCTTTGTATAAGTGAATTTATTGTTAAAAAGAATAAATATATTTAAAATAACACATCCTTATA
AAATAAGAATAAATTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: Cell Surface Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI
PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT
NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS
SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS

Sequences:

>Translated_294_residues
MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI
PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT
NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS
SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS
>Mature_294_residues
MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYECTIFNTGNSCIRKIIFRDLI
PRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATISFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRT
NKVTTNLKTNLLKQTEVRNIVKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS
SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33748; Mature: 33748

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYE
CCCCCCHHEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEEE
CTIFNTGNSCIRKIIFRDLIPRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATI
EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHCCCCCCCEEEEEECCCCEEEE
SFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRTNKVTTNLKTNLLKQTEVRNI
EEEEEEEECCCHHHHCCEEEEEECCEECCCCCCEEEEEEECEEEECHHHHHHHHHHHHHH
VKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS
EECCCCCCCEEEEEEEEEEEEEHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEC
SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS
CCCEEEEEEECCCEEECCCEEEEEEEEEEEECEEEEEECCEEEECCEEEEEECC
>Mature Secondary Structure
MQIVNQARVNFEYKKSHSSPIVIETALSNRALTYIICPSLKIKKCVDKLSASIFDILTYE
CCCCCCHHEEEEECCCCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHEEEEEEE
CTIFNTGNSCIRKIIFRDLIPRGTRFIFNSMTLNGEKERCKTPNKGLYIEKIKQGECATI
EEEEECCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHCCCCCCCEEEEEECCCCEEEE
SFNVLIVPTCDIKEIKNYATISYDSIYNVEKPPIRVCIRTNKVTTNLKTNLLKQTEVRNI
EEEEEEEECCCHHHHCCEEEEEECCEECCCCCCEEEEEEECEEEECHHHHHHHHHHHHHH
VKIPESYNAKINIYKIATKVELLNTKVINGLKNNKVLVLCKINYEISYRKCSINYKVTWS
EECCCCCCCEEEEEEEEEEEEEHHHHHHCCCCCCCEEEEEEECCEEEEEEEEEEEEEEEC
SGFSKLIFVPEGIKYYDNDLLLKNIKVYIEDFNCILLSTNKLFIDSQILIKIGS
CCCEEEEEEECCCEEECCCEEEEEEEEEEEECEEEEEECCEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA