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The map label for this gene is yfmM [H]

Identifier: 187935690

GI number: 187935690

Start: 1409418

End: 1411166

Strand: Reverse

Name: yfmM [H]

Synonym: CLL_A1372

Alternate gene names: 187935690

Gene position: 1411166-1409418 (Counterclockwise)

Preceding gene: 187935679

Following gene: 187933180

Centisome position: 37.13

GC content: 27.39

Gene sequence:

>1749_bases
ATGATAAAAGTTGATAACTTATCCTACTCATTTCCCCAAAAGGATTTATATAATAACATTTCATTTACATTAGAAGATGG
TGAGCATTGCGCTTTTATAGGAACAAATGGCAGTGGAAAAAGTACACTTATAGATATACTTATGGATCCAGAAGAATATC
TGTTTGATGGTACATTAGAAATATCTCCAAATTGTAGAATTGGGTATGTAAGTCAATTCTCACAACTAGATAAAATAAAA
GAAATTACAGTTTTCGAATATATATCAGAAGAGTTTATTAAACTACAAAATGAAATAACATCTATTTGTACTGAAATGGA
AACATCTTCAGATATTGATACTTTACTAGAAAAGTATCAACAAGTTTTAGATGCATTTGATGCAATTAATGGTGATGATT
TTGAAAATACTATTAATAAGAAGCTTAATCTTACAAACTTAATAAATTATAAAGATTTAATGGTATCTGAACTTAGTGGT
GGAGAATTCAAGCTTATTCAAGTAATTAAAGCAATGCTAAATAGCCCAGACTTAATAATTATGGATGAACCAGATGTGTT
TTTAGACTTTGGAAACCTTAATTCTCTTAAAAATCTAATTAATTCACACAAAGGAACAATGTTAATTATTACGCACAATA
GATATCTATTAAATAATTGTTTCAACAAAATTCTTCATCTTGAAAACATGGAGATACAAGAGTTTGATGGAAGCTATATT
GATTATAACTTCTCATTACTTCAAACTAAAATTGAATTACAAGAACTGGCTGCTGAAGATACTGCAGAAATTGAAAGAAA
TGATATATTAATAGAAAGACTTCGAGAGCTTGCAACTGAAAATGCGGAACAATTCAGAGGGAAAACCCTAAGGGCTAGAG
TTAAAATTCAAGAAAGATTAGAAGAACGTAGAATTAAAGCTCCATTTATAGCTATTAAAGAACCAGATATCAATTTAAAT
ACCTATAATAAACTTGAAGAAACTATTGCTTTAAAAGTTAATAATTACAGTGTTGCCTTTGATGAGATACTGTTAGAAAA
TGTTGACTTTGAGATTAAATCTACTGATAAAGTAGCTATTGTCGGTTCAAATGGTACTGGAAAAACCACTTTACTTAAAG
AAATATTTAAAAATAATAATAATTCTATTGAGGTAAATGAACAAGTTCAAATGGCTTATTTATCTCAGATTCAAGGCAAA
ACACTAAATGATTCTAATACCATACTTGAAGAGTTTTTGGAGGCTGGTTTTGAAACTTATGAAGACATTAAATTACATAT
TTTTGAATATGGTTTTGAAAATGAAGAAATACTTAATCAAAAGATAGAGTCTTTATCTGGTGGAGAAAAAAATATGCTTC
AATTAGCTAAAATTTCTGCTAGTAATGCAAACTTGTTGCTTCTTGATGAACCTACAAGCCACTTAGATACATATTCACAA
ATAGCATTAGAAAAAGCCATAAAAAATTATAATGGTGCTATTCTAATGGTTTCTCACGATTTCTATTCTATAGTGAACTG
TATGGATTATATTTTAATTGTTGAAGATAAGAAAATAAGAAGAATGAATATGAAAACTTTCAAAAAAATGGTTTATGCCA
ATTATTTTGGAAAAGATTATTTAGAAATTGAACAAAATAAAAAATTAGTTGAAACAAAAATAGAATTAGCTTTAAAAGAT
AATGATTTTACCACTGCAAAAGATTTATCTGAAGAGTTGGAAAAGCTGATTAAGTTACTACAAATTTAG

Upstream 100 bases:

>100_bases
TTACTACATAAAAATCAAGTGTAAAATTTCAATTGCTAAGAATATATTAAAGCGCTTATTTTTATAAGCTCTTTTTTAAG
TTATAAAGAGAGGTAATAAT

Downstream 100 bases:

>100_bases
TTAGTATGTAATCAAACTAAGAATACGTTAAATTAGTAAAATTAAAACTTAAATCTCATGGACAAATCTATTTTTTTTAA
TTAATATATACTAAATGAGG

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MIKVDNLSYSFPQKDLYNNISFTLEDGEHCAFIGTNGSGKSTLIDILMDPEEYLFDGTLEISPNCRIGYVSQFSQLDKIK
EITVFEYISEEFIKLQNEITSICTEMETSSDIDTLLEKYQQVLDAFDAINGDDFENTINKKLNLTNLINYKDLMVSELSG
GEFKLIQVIKAMLNSPDLIIMDEPDVFLDFGNLNSLKNLINSHKGTMLIITHNRYLLNNCFNKILHLENMEIQEFDGSYI
DYNFSLLQTKIELQELAAEDTAEIERNDILIERLRELATENAEQFRGKTLRARVKIQERLEERRIKAPFIAIKEPDINLN
TYNKLEETIALKVNNYSVAFDEILLENVDFEIKSTDKVAIVGSNGTGKTTLLKEIFKNNNNSIEVNEQVQMAYLSQIQGK
TLNDSNTILEEFLEAGFETYEDIKLHIFEYGFENEEILNQKIESLSGGEKNMLQLAKISASNANLLLLDEPTSHLDTYSQ
IALEKAIKNYNGAILMVSHDFYSIVNCMDYILIVEDKKIRRMNMKTFKKMVYANYFGKDYLEIEQNKKLVETKIELALKD
NDFTTAKDLSEELEKLIKLLQI

Sequences:

>Translated_582_residues
MIKVDNLSYSFPQKDLYNNISFTLEDGEHCAFIGTNGSGKSTLIDILMDPEEYLFDGTLEISPNCRIGYVSQFSQLDKIK
EITVFEYISEEFIKLQNEITSICTEMETSSDIDTLLEKYQQVLDAFDAINGDDFENTINKKLNLTNLINYKDLMVSELSG
GEFKLIQVIKAMLNSPDLIIMDEPDVFLDFGNLNSLKNLINSHKGTMLIITHNRYLLNNCFNKILHLENMEIQEFDGSYI
DYNFSLLQTKIELQELAAEDTAEIERNDILIERLRELATENAEQFRGKTLRARVKIQERLEERRIKAPFIAIKEPDINLN
TYNKLEETIALKVNNYSVAFDEILLENVDFEIKSTDKVAIVGSNGTGKTTLLKEIFKNNNNSIEVNEQVQMAYLSQIQGK
TLNDSNTILEEFLEAGFETYEDIKLHIFEYGFENEEILNQKIESLSGGEKNMLQLAKISASNANLLLLDEPTSHLDTYSQ
IALEKAIKNYNGAILMVSHDFYSIVNCMDYILIVEDKKIRRMNMKTFKKMVYANYFGKDYLEIEQNKKLVETKIELALKD
NDFTTAKDLSEELEKLIKLLQI
>Mature_582_residues
MIKVDNLSYSFPQKDLYNNISFTLEDGEHCAFIGTNGSGKSTLIDILMDPEEYLFDGTLEISPNCRIGYVSQFSQLDKIK
EITVFEYISEEFIKLQNEITSICTEMETSSDIDTLLEKYQQVLDAFDAINGDDFENTINKKLNLTNLINYKDLMVSELSG
GEFKLIQVIKAMLNSPDLIIMDEPDVFLDFGNLNSLKNLINSHKGTMLIITHNRYLLNNCFNKILHLENMEIQEFDGSYI
DYNFSLLQTKIELQELAAEDTAEIERNDILIERLRELATENAEQFRGKTLRARVKIQERLEERRIKAPFIAIKEPDINLN
TYNKLEETIALKVNNYSVAFDEILLENVDFEIKSTDKVAIVGSNGTGKTTLLKEIFKNNNNSIEVNEQVQMAYLSQIQGK
TLNDSNTILEEFLEAGFETYEDIKLHIFEYGFENEEILNQKIESLSGGEKNMLQLAKISASNANLLLLDEPTSHLDTYSQ
IALEKAIKNYNGAILMVSHDFYSIVNCMDYILIVEDKKIRRMNMKTFKKMVYANYFGKDYLEIEQNKKLVETKIELALKD
NDFTTAKDLSEELEKLIKLLQI

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=24.5353159851301, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI10947135, Length=532, Percent_Identity=24.2481203007519, Blast_Score=135, Evalue=8e-32,
Organism=Homo sapiens, GI69354671, Length=532, Percent_Identity=24.2481203007519, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI10947137, Length=539, Percent_Identity=25.0463821892393, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI27881506, Length=539, Percent_Identity=25.0463821892393, Blast_Score=130, Evalue=3e-30,
Organism=Escherichia coli, GI2367384, Length=525, Percent_Identity=27.047619047619, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1789751, Length=520, Percent_Identity=26.1538461538462, Blast_Score=175, Evalue=7e-45,
Organism=Escherichia coli, GI1787041, Length=528, Percent_Identity=26.7045454545455, Blast_Score=160, Evalue=3e-40,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=26.1425959780622, Blast_Score=155, Evalue=9e-39,
Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=27.9187817258883, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI87081834, Length=227, Percent_Identity=26.431718061674, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787164, Length=218, Percent_Identity=26.1467889908257, Blast_Score=70, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17559834, Length=552, Percent_Identity=24.8188405797101, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI17553372, Length=571, Percent_Identity=25.2189141856392, Blast_Score=134, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17555318, Length=541, Percent_Identity=23.1053604436229, Blast_Score=128, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI25146777, Length=290, Percent_Identity=25.5172413793103, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI193208177, Length=250, Percent_Identity=26.4, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=26.7161410018553, Blast_Score=153, Evalue=7e-38,
Organism=Saccharomyces cerevisiae, GI6320874, Length=552, Percent_Identity=23.5507246376812, Blast_Score=124, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=187, Percent_Identity=33.1550802139037, Blast_Score=100, Evalue=9e-22,
Organism=Saccharomyces cerevisiae, GI6324314, Length=188, Percent_Identity=30.3191489361702, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6325030, Length=212, Percent_Identity=30.188679245283, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=25.2747252747253, Blast_Score=151, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=26.3837638376384, Blast_Score=144, Evalue=2e-34,
Organism=Drosophila melanogaster, GI24642252, Length=541, Percent_Identity=23.6598890942699, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI18859989, Length=541, Percent_Identity=23.6598890942699, Blast_Score=129, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 66941; Mature: 66941

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKVDNLSYSFPQKDLYNNISFTLEDGEHCAFIGTNGSGKSTLIDILMDPEEYLFDGTLE
CEEECCCCCCCCHHHHCCCCEEEEECCCEEEEEECCCCCCCEEEEEEECCHHHHCCCEEE
ISPNCRIGYVSQFSQLDKIKEITVFEYISEEFIKLQNEITSICTEMETSSDIDTLLEKYQ
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QVLDAFDAINGDDFENTINKKLNLTNLINYKDLMVSELSGGEFKLIQVIKAMLNSPDLII
HHHHHHHCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE
MDEPDVFLDFGNLNSLKNLINSHKGTMLIITHNRYLLNNCFNKILHLENMEIQEFDGSYI
EECCCEEEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCEE
DYNFSLLQTKIELQELAAEDTAEIERNDILIERLRELATENAEQFRGKTLRARVKIQERL
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
EERRIKAPFIAIKEPDINLNTYNKLEETIALKVNNYSVAFDEILLENVDFEIKSTDKVAI
HHCCCCCCEEEEECCCCCCCCHHHHHHEEEEEECCCEEHHHHHHHHCCCEEEECCCEEEE
VGSNGTGKTTLLKEIFKNNNNSIEVNEQVQMAYLSQIQGKTLNDSNTILEEFLEAGFETY
EECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH
EDIKLHIFEYGFENEEILNQKIESLSGGEKNMLQLAKISASNANLLLLDEPTSHLDTYSQ
HCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEEECCHHHHHHHHH
IALEKAIKNYNGAILMVSHDFYSIVNCMDYILIVEDKKIRRMNMKTFKKMVYANYFGKDY
HHHHHHHHCCCCEEEEEECHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
LEIEQNKKLVETKIELALKDNDFTTAKDLSEELEKLIKLLQI
EEECCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKVDNLSYSFPQKDLYNNISFTLEDGEHCAFIGTNGSGKSTLIDILMDPEEYLFDGTLE
CEEECCCCCCCCHHHHCCCCEEEEECCCEEEEEECCCCCCCEEEEEEECCHHHHCCCEEE
ISPNCRIGYVSQFSQLDKIKEITVFEYISEEFIKLQNEITSICTEMETSSDIDTLLEKYQ
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
QVLDAFDAINGDDFENTINKKLNLTNLINYKDLMVSELSGGEFKLIQVIKAMLNSPDLII
HHHHHHHCCCCCCHHHHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEE
MDEPDVFLDFGNLNSLKNLINSHKGTMLIITHNRYLLNNCFNKILHLENMEIQEFDGSYI
EECCCEEEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCHHHCCCCEE
DYNFSLLQTKIELQELAAEDTAEIERNDILIERLRELATENAEQFRGKTLRARVKIQERL
EEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
EERRIKAPFIAIKEPDINLNTYNKLEETIALKVNNYSVAFDEILLENVDFEIKSTDKVAI
HHCCCCCCEEEEECCCCCCCCHHHHHHEEEEEECCCEEHHHHHHHHCCCEEEECCCEEEE
VGSNGTGKTTLLKEIFKNNNNSIEVNEQVQMAYLSQIQGKTLNDSNTILEEFLEAGFETY
EECCCCCHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCH
EDIKLHIFEYGFENEEILNQKIESLSGGEKNMLQLAKISASNANLLLLDEPTSHLDTYSQ
HCEEEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHEECCCCCCEEEEECCHHHHHHHHH
IALEKAIKNYNGAILMVSHDFYSIVNCMDYILIVEDKKIRRMNMKTFKKMVYANYFGKDY
HHHHHHHHCCCCEEEEEECHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHCCCCC
LEIEQNKKLVETKIELALKDNDFTTAKDLSEELEKLIKLLQI
EEECCCCHHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]