| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is mglB [H]
Identifier: 187935611
GI number: 187935611
Start: 2712443
End: 2713480
Strand: Reverse
Name: mglB [H]
Synonym: CLL_A2600
Alternate gene names: 187935611
Gene position: 2713480-2712443 (Counterclockwise)
Preceding gene: 187934863
Following gene: 187932677
Centisome position: 71.4
GC content: 27.36
Gene sequence:
>1038_bases ATGAAAATTTTAAAAAGAGTACTAATGTTTATTATAATAATAATTTTAGTGATAGAGATTCCTAGTAATAATATAATTGT TAATTCAAGTGTTATACCAAAAAATCCAATTAAAATAGGGGTGTTCTTACACAGTTATGATGAATATCTTTCTCTTGTAA AACAAAATTTAGAAGCAATTCAAAGTGAAAATCAGGATAAAGTTCAGTTTATCTTCTTTAATGCAAAAGAAAATCAGTCC ATACAAAATGAGAGTATTGATAAAGCTCTTACAGAGAATTTTGATCTTTTAATTGTAAATTTACATACTATAAATTTAAA GGAAGTAGGAGACACACTATCTAAAATAATTAAAAATAATATGCCATTAATTTTATTTGGAGAGCCAGATGAAAAGTTAA TAAATTTTGTTAAAGACAATGGTATTTTTATAGCAAGTTATGGAAAAGATTCTGGTATTTTAGAGGGGAAAATTATTGCT GATGAATGGATGAATAATAAAGAAGCTATAGATAAAAATGGTGACAATATACTACAGTACATTATTTTAAAGGGAAGAAT TGGTGATCCAATAGTGAATGAAAGAACAAAATATGCTATTTCAACACTAAAAAAAGAGGGCATAAAAATAGAAGAACTTG CATCTGTAAATGGTGAATGGAATAAAGATTTAGCTAAGAGGGCGATTGAATCTTTATTTTTAATATATGGAAATAGAATT GAAGCAATAATTTCAAATAATGATGAGATGGCCATAGGTGCTATTGAAGCATTACAGAAGTATGGATATAATACAGGGAA TAAATCAACAAGTATACCGGTTGTTGGGATAGACGGTATAGAGACAGCTAAGGATTTAATACAAAAGGGATTTATGACAG GAACTGTTATTCAAGATCCACGTAATCAAGCTGAAGCTCTTTATAAAGTTGGAATGAATTTAGCTTCTGGAAAATACCCT CTTGAAAACACAAATTATAAATTTGATGATACAGGTGTTGTAATTCGTTTTCCATATAAAGAATATATAAAACAATAA
Upstream 100 bases:
>100_bases TTAAAAATTAATAAACATAAAAGTAAGAGAATATTTATTTCTTTAAAAACACACCCTAAAAGTGATTATAATAATCAAAT AAATATTTTGGAGGATCATC
Downstream 100 bases:
>100_bases AAACACAAAGGTGTATTGTAAAATTTAACAATACACCTTTATATTTTTTATAAAAGCATTAATAAGTTTTTCTATAAAAT CTTTTCTTAAAAACATATTC
Product: D-galactose-binding periplasmic protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: GBP; D-galactose/ D-glucose-binding protein; GGBP [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKILKRVLMFIIIIILVIEIPSNNIIVNSSVIPKNPIKIGVFLHSYDEYLSLVKQNLEAIQSENQDKVQFIFFNAKENQS IQNESIDKALTENFDLLIVNLHTINLKEVGDTLSKIIKNNMPLILFGEPDEKLINFVKDNGIFIASYGKDSGILEGKIIA DEWMNNKEAIDKNGDNILQYIILKGRIGDPIVNERTKYAISTLKKEGIKIEELASVNGEWNKDLAKRAIESLFLIYGNRI EAIISNNDEMAIGAIEALQKYGYNTGNKSTSIPVVGIDGIETAKDLIQKGFMTGTVIQDPRNQAEALYKVGMNLASGKYP LENTNYKFDDTGVVIRFPYKEYIKQ
Sequences:
>Translated_345_residues MKILKRVLMFIIIIILVIEIPSNNIIVNSSVIPKNPIKIGVFLHSYDEYLSLVKQNLEAIQSENQDKVQFIFFNAKENQS IQNESIDKALTENFDLLIVNLHTINLKEVGDTLSKIIKNNMPLILFGEPDEKLINFVKDNGIFIASYGKDSGILEGKIIA DEWMNNKEAIDKNGDNILQYIILKGRIGDPIVNERTKYAISTLKKEGIKIEELASVNGEWNKDLAKRAIESLFLIYGNRI EAIISNNDEMAIGAIEALQKYGYNTGNKSTSIPVVGIDGIETAKDLIQKGFMTGTVIQDPRNQAEALYKVGMNLASGKYP LENTNYKFDDTGVVIRFPYKEYIKQ >Mature_345_residues MKILKRVLMFIIIIILVIEIPSNNIIVNSSVIPKNPIKIGVFLHSYDEYLSLVKQNLEAIQSENQDKVQFIFFNAKENQS IQNESIDKALTENFDLLIVNLHTINLKEVGDTLSKIIKNNMPLILFGEPDEKLINFVKDNGIFIASYGKDSGILEGKIIA DEWMNNKEAIDKNGDNILQYIILKGRIGDPIVNERTKYAISTLKKEGIKIEELASVNGEWNKDLAKRAIESLFLIYGNRI EAIISNNDEMAIGAIEALQKYGYNTGNKSTSIPVVGIDGIETAKDLIQKGFMTGTVIQDPRNQAEALYKVGMNLASGKYP LENTNYKFDDTGVVIRFPYKEYIKQ
Specific function: This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=305, Percent_Identity=35.7377049180328, Blast_Score=175, Evalue=3e-45,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 38854; Mature: 38854
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILKRVLMFIIIIILVIEIPSNNIIVNSSVIPKNPIKIGVFLHSYDEYLSLVKQNLEAI CHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHH QSENQDKVQFIFFNAKENQSIQNESIDKALTENFDLLIVNLHTINLKEVGDTLSKIIKNN HCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHCC MPLILFGEPDEKLINFVKDNGIFIASYGKDSGILEGKIIADEWMNNKEAIDKNGDNILQY CCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCEECEEEHHHHCCCCHHHCCCCCCEEEE IILKGRIGDPIVNERTKYAISTLKKEGIKIEELASVNGEWNKDLAKRAIESLFLIYGNRI EEEECCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEE EAIISNNDEMAIGAIEALQKYGYNTGNKSTSIPVVGIDGIETAKDLIQKGFMTGTVIQDP EEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEECCC RNQAEALYKVGMNLASGKYPLENTNYKFDDTGVVIRFPYKEYIKQ HHHHHHHHHHCCHHCCCCCCCCCCCEEECCCCEEEECCHHHHHCC >Mature Secondary Structure MKILKRVLMFIIIIILVIEIPSNNIIVNSSVIPKNPIKIGVFLHSYDEYLSLVKQNLEAI CHHHHHHHHHHHHHHHHEECCCCCEEEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHH QSENQDKVQFIFFNAKENQSIQNESIDKALTENFDLLIVNLHTINLKEVGDTLSKIIKNN HCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEECHHHHHHHHHHHHHCC MPLILFGEPDEKLINFVKDNGIFIASYGKDSGILEGKIIADEWMNNKEAIDKNGDNILQY CCEEEECCCHHHHHHHHHCCCEEEEECCCCCCCEECEEEHHHHCCCCHHHCCCCCCEEEE IILKGRIGDPIVNERTKYAISTLKKEGIKIEELASVNGEWNKDLAKRAIESLFLIYGNRI EEEECCCCCCHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEE EAIISNNDEMAIGAIEALQKYGYNTGNKSTSIPVVGIDGIETAKDLIQKGFMTGTVIQDP EEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEECCC RNQAEALYKVGMNLASGKYPLENTNYKFDDTGVVIRFPYKEYIKQ HHHHHHHHHHCCHHCCCCCCCCCCCEEECCCCEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA