Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
---|---|
Accession | NC_010674 |
Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187935608
Identifier: 187935608
GI number: 187935608
Start: 2270349
End: 2270816
Strand: Reverse
Name: 187935608
Synonym: CLL_A2183
Alternate gene names: NA
Gene position: 2270816-2270349 (Counterclockwise)
Preceding gene: 187932490
Following gene: 187933264
Centisome position: 59.75
GC content: 27.99
Gene sequence:
>468_bases ATGAATAGCATGTTTAATCAAATTATGCTTAATATAAAACGAGGATATTATAAATATATTGGATCTGGTTCCAGTAGAGA CGTATTTGATTTGGGAAATGGATATGTAATCAAAGTGGCAAAAAATAGAGCCGGGATTGCGCAAAATAAGTCTGAGTATA ATATTTCATATTATGATAATTCAGGTCTATTTGCAAAAGTTGTAGCTGTTTCAAATAACTTTAATTTGTTAATAATGGAA AAGGCAGATAAGGTATATAATATTTCATATGTATGGAAGTACTTCGATGTTAAAGAAAAGAAAGGATTGTTTAGTTTAGA ACAACTAAGCGATATTTTAAAGCACTATAATTTATTATTGAATGATTTAAAGAAGAACAGTAGCTGGGGAATGATTAATG GAAGATTTGTAATAATTGATTATGGTTTTACAAGAGAAGTCCATACAAGGTATTATCGATCTTTTTAG
Upstream 100 bases:
>100_bases AGTTATGATAACAAGTTGAACAAATTTACTGTAGAACGAATAATATATATCATATTTTACTAATGAATATAACGTGATTA CCATAAAGCAGGTGTTTCAG
Downstream 100 bases:
>100_bases AGACAAGGTGAAATATTCTATATTGTATTTAGAAACAATTATGTAATGTTTGGAATATAGTATAATGTATAAAAGAGTAG CGGTGATTGATATGCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF
Sequences:
>Translated_155_residues MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF >Mature_155_residues MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18117; Mature: 18117
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDN CCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEC SGLFAKVVAVSNNFNLLIMEKADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLL CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH NDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF HHHHCCCCCCEECCEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDN CCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEC SGLFAKVVAVSNNFNLLIMEKADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLL CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH NDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF HHHHCCCCCCEECCEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA