Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is 187935608

Identifier: 187935608

GI number: 187935608

Start: 2270349

End: 2270816

Strand: Reverse

Name: 187935608

Synonym: CLL_A2183

Alternate gene names: NA

Gene position: 2270816-2270349 (Counterclockwise)

Preceding gene: 187932490

Following gene: 187933264

Centisome position: 59.75

GC content: 27.99

Gene sequence:

>468_bases
ATGAATAGCATGTTTAATCAAATTATGCTTAATATAAAACGAGGATATTATAAATATATTGGATCTGGTTCCAGTAGAGA
CGTATTTGATTTGGGAAATGGATATGTAATCAAAGTGGCAAAAAATAGAGCCGGGATTGCGCAAAATAAGTCTGAGTATA
ATATTTCATATTATGATAATTCAGGTCTATTTGCAAAAGTTGTAGCTGTTTCAAATAACTTTAATTTGTTAATAATGGAA
AAGGCAGATAAGGTATATAATATTTCATATGTATGGAAGTACTTCGATGTTAAAGAAAAGAAAGGATTGTTTAGTTTAGA
ACAACTAAGCGATATTTTAAAGCACTATAATTTATTATTGAATGATTTAAAGAAGAACAGTAGCTGGGGAATGATTAATG
GAAGATTTGTAATAATTGATTATGGTTTTACAAGAGAAGTCCATACAAGGTATTATCGATCTTTTTAG

Upstream 100 bases:

>100_bases
AGTTATGATAACAAGTTGAACAAATTTACTGTAGAACGAATAATATATATCATATTTTACTAATGAATATAACGTGATTA
CCATAAAGCAGGTGTTTCAG

Downstream 100 bases:

>100_bases
AGACAAGGTGAAATATTCTATATTGTATTTAGAAACAATTATGTAATGTTTGGAATATAGTATAATGTATAAAAGAGTAG
CGGTGATTGATATGCCATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME
KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF

Sequences:

>Translated_155_residues
MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME
KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF
>Mature_155_residues
MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDNSGLFAKVVAVSNNFNLLIME
KADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLLNDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18117; Mature: 18117

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDN
CCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEC
SGLFAKVVAVSNNFNLLIMEKADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLL
CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
NDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF
HHHHCCCCCCEECCEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MNSMFNQIMLNIKRGYYKYIGSGSSRDVFDLGNGYVIKVAKNRAGIAQNKSEYNISYYDN
CCHHHHHHHHHHHCCCEEEECCCCCCCEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEC
SGLFAKVVAVSNNFNLLIMEKADKVYNISYVWKYFDVKEKKGLFSLEQLSDILKHYNLLL
CCCEEEEEEECCCCCEEEEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
NDLKKNSSWGMINGRFVIIDYGFTREVHTRYYRSF
HHHHCCCCCCEECCEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA