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The map label for this gene is ydcF [H]

Identifier: 187935563

GI number: 187935563

Start: 2784553

End: 2785341

Strand: Reverse

Name: ydcF [H]

Synonym: CLL_A2665

Alternate gene names: 187935563

Gene position: 2785341-2784553 (Counterclockwise)

Preceding gene: 187933590

Following gene: 187934580

Centisome position: 73.29

GC content: 30.29

Gene sequence:

>789_bases
ATGAAAGATAAAATAGCAAAAAATATTAATATATTGGGTAAATTCTGTGGGAAAAGAGACATATCAGCACTGACTTTAAG
TGAGTTAAAATTAAAATATGGTTTAGAACAAGCTGATGTTATGGTTCTTTTTGGTGGAAGTATTTTGCTAGGTGGAGATA
TTTTAGCTGAAGCAATGAAAAATAAAATTGCTAAGAAATTTGTTATTGTTGGTGGTGCAGGACATACCACAGAAACTTTG
CGAATGAAAATGCATAATGAATTTTCAGAAATTGAAACTGATGGATTGCCAGAAGCAAAGATATTTGCAGCATATTTAAA
GTACAAATATAATCTTGAACCAGATTTATTGGAATGTAAATCTACAAATTGTGGCAACAATATAACATACTTATTAGACC
TGTTGAAAGAGAATAATGTATCTTTTAAAAGTATCATTATTTCTCAGGATGCAACTATGCAAAATCGTATGGAGGCAGGA
CTTCGAAAATATATTTCTAAAGATAATATAATAATCAATTATGCAGTTTATGATGCAGAAGTTGTTGTACGAGACAATGA
ATTAGAGTTTAAAGAGGGTATTTGGGGAATGTGGAACATAGAAAGATATATTACACTATTGATGGGAGAGATTCCACGAC
TTTCAGATGATGCCGAAGGATATGGACCAAATGGTAAAAATTATATTGAACATATAGAAATACCAATTGAGGTTATGAAT
GCATTTATTGAATTAAAGAAAGAGTATAGTTCTTTCATCCGTGAAGCAAACTCAATCTATTCATCATAA

Upstream 100 bases:

>100_bases
GACTTAGAAGAGTATGGCGAAGGTATTTACTATGGATTTATATGCAATGAGTGTAAAATTGCAGCTACTGGATATCAGCA
GACATAAAATGGAGGAGAAC

Downstream 100 bases:

>100_bases
CGATAAATTCTAATTTGGAAGGGAAATTTTTAATGATAACTAAACACGTAATAGTAGAAGATTATTATAAAGTCTCAAAA
AATATATATGAAAAATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKDKIAKNINILGKFCGKRDISALTLSELKLKYGLEQADVMVLFGGSILLGGDILAEAMKNKIAKKFVIVGGAGHTTETL
RMKMHNEFSEIETDGLPEAKIFAAYLKYKYNLEPDLLECKSTNCGNNITYLLDLLKENNVSFKSIIISQDATMQNRMEAG
LRKYISKDNIIINYAVYDAEVVVRDNELEFKEGIWGMWNIERYITLLMGEIPRLSDDAEGYGPNGKNYIEHIEIPIEVMN
AFIELKKEYSSFIREANSIYSS

Sequences:

>Translated_262_residues
MKDKIAKNINILGKFCGKRDISALTLSELKLKYGLEQADVMVLFGGSILLGGDILAEAMKNKIAKKFVIVGGAGHTTETL
RMKMHNEFSEIETDGLPEAKIFAAYLKYKYNLEPDLLECKSTNCGNNITYLLDLLKENNVSFKSIIISQDATMQNRMEAG
LRKYISKDNIIINYAVYDAEVVVRDNELEFKEGIWGMWNIERYITLLMGEIPRLSDDAEGYGPNGKNYIEHIEIPIEVMN
AFIELKKEYSSFIREANSIYSS
>Mature_262_residues
MKDKIAKNINILGKFCGKRDISALTLSELKLKYGLEQADVMVLFGGSILLGGDILAEAMKNKIAKKFVIVGGAGHTTETL
RMKMHNEFSEIETDGLPEAKIFAAYLKYKYNLEPDLLECKSTNCGNNITYLLDLLKENNVSFKSIIISQDATMQNRMEAG
LRKYISKDNIIINYAVYDAEVVVRDNELEFKEGIWGMWNIERYITLLMGEIPRLSDDAEGYGPNGKNYIEHIEIPIEVMN
AFIELKKEYSSFIREANSIYSS

Specific function: Binds S-adenosyl-L-methionine (AdoMet) [H]

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To S.coelicolor SCO4629 [H]

Homologues:

Organism=Escherichia coli, GI1787683, Length=247, Percent_Identity=31.5789473684211, Blast_Score=130, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29681; Mature: 29681

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDKIAKNINILGKFCGKRDISALTLSELKLKYGLEQADVMVLFGGSILLGGDILAEAMK
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECHHHHHHHHH
NKIAKKFVIVGGAGHTTETLRMKMHNEFSEIETDGLPEAKIFAAYLKYKYNLEPDLLECK
HHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCC
STNCGNNITYLLDLLKENNVSFKSIIISQDATMQNRMEAGLRKYISKDNIIINYAVYDAE
CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
VVVRDNELEFKEGIWGMWNIERYITLLMGEIPRLSDDAEGYGPNGKNYIEHIEIPIEVMN
EEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCHHHHH
AFIELKKEYSSFIREANSIYSS
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDKIAKNINILGKFCGKRDISALTLSELKLKYGLEQADVMVLFGGSILLGGDILAEAMK
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCEEECHHHHHHHHH
NKIAKKFVIVGGAGHTTETLRMKMHNEFSEIETDGLPEAKIFAAYLKYKYNLEPDLLECK
HHHHHEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHCCC
STNCGNNITYLLDLLKENNVSFKSIIISQDATMQNRMEAGLRKYISKDNIIINYAVYDAE
CCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
VVVRDNELEFKEGIWGMWNIERYITLLMGEIPRLSDDAEGYGPNGKNYIEHIEIPIEVMN
EEEECCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHEECCHHHHH
AFIELKKEYSSFIREANSIYSS
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 10493123 [H]