| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935556
Identifier: 187935556
GI number: 187935556
Start: 3328818
End: 3329363
Strand: Reverse
Name: 187935556
Synonym: CLL_A3200
Alternate gene names: NA
Gene position: 3329363-3328818 (Counterclockwise)
Preceding gene: 187933570
Following gene: 187933046
Centisome position: 87.61
GC content: 25.09
Gene sequence:
>546_bases ATGGTTGAGGTAAGATATAAGAATACTGAAGAACAATGGGTTGGTTTTTCTATTTACAAAATTAATAATGATAGAAGTCA TGAAAGACTAGCTAAGTTAAGAAGACACTTATTTTTAGGTATAGGTTTTTTTATAGCGGTATTATATTGTATTTTGGGTA TGCAAGAATATAGTAAAGGTGAGAGCCCTATATTTTCTATTTTACTTGCAGTCATTTTTGCAGTATTAGGAATAGGTGGC TACTTAGCATTACCTACATATTGGGTTAAAAAAACAAATAAAAATTTAAAAGAATTATTTAAGAAAAATGAAAAAGCACT TGGAAGAACTATAGAAGTGTTATTAGAAAAAGATGGATTAACAATTAATAGAAATAAGGAAAAGACAAGAATACTATTAA ATAGCATAACAGATGTTACGGAAATAAATGATTGTTTGTATGTAATTTCAAATGATAATCCTGGAATAGTTATTCCTAAT AATGCATTTAAAAATGAAGATGATAAGATAAATTTTAAAAATACTATAATGAATAATATAAAATAG
Upstream 100 bases:
>100_bases TATAGTATAGGTAAAATTTGATTTCAATCCAATTTAAAGTTCAAAAATATATTAAAATAAACATTAATTTATATACTAAC AAGAGTGTGAGGGGAAGAGA
Downstream 100 bases:
>100_bases TTAACATAACATTTTAAAGCTATATTTTAAGTTGCAATTTAACTTAAAATATAGCTTATTTTTTTATTGGACTAGCAATT TTCTGACTTAAAGCCGAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MVEVRYKNTEEQWVGFSIYKINNDRSHERLAKLRRHLFLGIGFFIAVLYCILGMQEYSKGESPIFSILLAVIFAVLGIGG YLALPTYWVKKTNKNLKELFKKNEKALGRTIEVLLEKDGLTINRNKEKTRILLNSITDVTEINDCLYVISNDNPGIVIPN NAFKNEDDKINFKNTIMNNIK
Sequences:
>Translated_181_residues MVEVRYKNTEEQWVGFSIYKINNDRSHERLAKLRRHLFLGIGFFIAVLYCILGMQEYSKGESPIFSILLAVIFAVLGIGG YLALPTYWVKKTNKNLKELFKKNEKALGRTIEVLLEKDGLTINRNKEKTRILLNSITDVTEINDCLYVISNDNPGIVIPN NAFKNEDDKINFKNTIMNNIK >Mature_181_residues MVEVRYKNTEEQWVGFSIYKINNDRSHERLAKLRRHLFLGIGFFIAVLYCILGMQEYSKGESPIFSILLAVIFAVLGIGG YLALPTYWVKKTNKNLKELFKKNEKALGRTIEVLLEKDGLTINRNKEKTRILLNSITDVTEINDCLYVISNDNPGIVIPN NAFKNEDDKINFKNTIMNNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20847; Mature: 20847
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVRYKNTEEQWVGFSIYKINNDRSHERLAKLRRHLFLGIGFFIAVLYCILGMQEYSKG CEEEEECCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC ESPIFSILLAVIFAVLGIGGYLALPTYWVKKTNKNLKELFKKNEKALGRTIEVLLEKDGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TINRNKEKTRILLNSITDVTEINDCLYVISNDNPGIVIPNNAFKNEDDKINFKNTIMNNI EEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHCC K C >Mature Secondary Structure MVEVRYKNTEEQWVGFSIYKINNDRSHERLAKLRRHLFLGIGFFIAVLYCILGMQEYSKG CEEEEECCCCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCC ESPIFSILLAVIFAVLGIGGYLALPTYWVKKTNKNLKELFKKNEKALGRTIEVLLEKDGL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC TINRNKEKTRILLNSITDVTEINDCLYVISNDNPGIVIPNNAFKNEDDKINFKNTIMNNI EEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA