| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935548
Identifier: 187935548
GI number: 187935548
Start: 2828900
End: 2829340
Strand: Reverse
Name: 187935548
Synonym: CLL_A2719
Alternate gene names: NA
Gene position: 2829340-2828900 (Counterclockwise)
Preceding gene: 187935574
Following gene: 187934539
Centisome position: 74.45
GC content: 32.2
Gene sequence:
>441_bases ATGCCTAATCTATTTCCAACAGCTAACGAAGAAACAATAAACTTAGAAGAAGACACACAACAAAAATTTAAAGGGTCTTA TGCTATAAACTTTGAAACAGGGGAGTTCATTAAAAACTCTGATGGAACTATTAAAATATTAGATGAATTTGAAGCATATG TACAGTGGTGCGAAAAGGCAATGCTTACAGCACGATATAAATATGGGGCTTATTCAGATAGGTATGGAAAAGACATTATA GGCTCAGATATTACAGATAAAAAGTTTGTAGAGTTAGAACTTAAAAGAATCACACAAGAGGCGTTAATGGTACATCCATT AACCAAAAGTGTTGATTCTTTTTCTTTTGAGTGGAAAGGTAGTGACGTTTATTATAGCTTTGAAGTTACTACTACTAAAA ACAGAAACAAAGTGCTTAAAAGTAATAAGAAAGTGTGGTGA
Upstream 100 bases:
>100_bases TTTAAAACACCTGAAAACTTAAAATCAATAAAACCTGGTGATAGAGTATTAGTGGCTAGAATAGGAAATGAATGTGTAAT AGTAGGGAGAGTGAGTACTA
Downstream 100 bases:
>100_bases TAAAAATGGAAATGCCTGATTTTTTAACAGAAGATGTTGAAAAAATTCATAGGAGAATGATGGAGAAAGCACCTCCGGGA GTATCTGCAATAGAAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MPNLFPTANEETINLEEDTQQKFKGSYAINFETGEFIKNSDGTIKILDEFEAYVQWCEKAMLTARYKYGAYSDRYGKDII GSDITDKKFVELELKRITQEALMVHPLTKSVDSFSFEWKGSDVYYSFEVTTTKNRNKVLKSNKKVW
Sequences:
>Translated_146_residues MPNLFPTANEETINLEEDTQQKFKGSYAINFETGEFIKNSDGTIKILDEFEAYVQWCEKAMLTARYKYGAYSDRYGKDII GSDITDKKFVELELKRITQEALMVHPLTKSVDSFSFEWKGSDVYYSFEVTTTKNRNKVLKSNKKVW >Mature_145_residues PNLFPTANEETINLEEDTQQKFKGSYAINFETGEFIKNSDGTIKILDEFEAYVQWCEKAMLTARYKYGAYSDRYGKDIIG SDITDKKFVELELKRITQEALMVHPLTKSVDSFSFEWKGSDVYYSFEVTTTKNRNKVLKSNKKVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17015; Mature: 16884
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLFPTANEETINLEEDTQQKFKGSYAINFETGEFIKNSDGTIKILDEFEAYVQWCEKA CCCCCCCCCCCEECCCHHHHHHHCCCEEEEECCCCEEECCCCEEEEHHHHHHHHHHHHHH MLTARYKYGAYSDRYGKDIIGSDITDKKFVELELKRITQEALMVHPLTKSVDSFSFEWKG HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC SDVYYSFEVTTTKNRNKVLKSNKKVW CEEEEEEEEEECCCCHHHHCCCCCCC >Mature Secondary Structure PNLFPTANEETINLEEDTQQKFKGSYAINFETGEFIKNSDGTIKILDEFEAYVQWCEKA CCCCCCCCCCEECCCHHHHHHHCCCEEEEECCCCEEECCCCEEEEHHHHHHHHHHHHHH MLTARYKYGAYSDRYGKDIIGSDITDKKFVELELKRITQEALMVHPLTKSVDSFSFEWKG HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC SDVYYSFEVTTTKNRNKVLKSNKKVW CEEEEEEEEEECCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA