Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187935394

Identifier: 187935394

GI number: 187935394

Start: 1139668

End: 1140108

Strand: Reverse

Name: 187935394

Synonym: CLL_A1111

Alternate gene names: NA

Gene position: 1140108-1139668 (Counterclockwise)

Preceding gene: 187932480

Following gene: 187935418

Centisome position: 30.0

GC content: 23.81

Gene sequence:

>441_bases
ATGGAAATAAATAATAATTTAAACTACAAAAATATAATTAATTTTGATTTTTATAAAAATTATTTATCTGCTTCAAATAA
TAAAAGTACTGTTAATACTACTACTGATTCAATTGAAATAAATGAAACTAATTTTAATGTTATTAATACTAAAAAAGCTT
ATGATGCTTTCAAAGAGGCTAATCAAGGAGAATTTGGTGATAATTCCTTTTTATATGCTATAATAAAAGATATGATGAAA
GATGATGGGATAGATGTACCAGACTTTACTCCAAATAATACTACTGCTTTTCTTCCATTCATAGATAAAATGAAAGAATA
TGCTAAGAATCTAATGACTGATCCAAATTATCATCAAGTAGGAGGAATGCCTCTTACAGATGAATTCTTAGATTTTTGTG
ATTTATATAAAGAAAAACTTATTCAATACGATTGCAAATAA

Upstream 100 bases:

>100_bases
ATATTATGAACCCCAATCAATGTTTATTTATTACTATTAAGTTTTTTATTTCCTTTTCGATTATATATTTATAAATTACT
TTGTATCAAAGGAGATTCTT

Downstream 100 bases:

>100_bases
CAAATATTAGCACTAAAAATAAAGGTTACAACAAAATCCTGTTGTAACCTTTTCTTAATCATTATCAAAGCTTAAATAAA
ATTTCTATAATTAATACATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MEINNNLNYKNIINFDFYKNYLSASNNKSTVNTTTDSIEINETNFNVINTKKAYDAFKEANQGEFGDNSFLYAIIKDMMK
DDGIDVPDFTPNNTTAFLPFIDKMKEYAKNLMTDPNYHQVGGMPLTDEFLDFCDLYKEKLIQYDCK

Sequences:

>Translated_146_residues
MEINNNLNYKNIINFDFYKNYLSASNNKSTVNTTTDSIEINETNFNVINTKKAYDAFKEANQGEFGDNSFLYAIIKDMMK
DDGIDVPDFTPNNTTAFLPFIDKMKEYAKNLMTDPNYHQVGGMPLTDEFLDFCDLYKEKLIQYDCK
>Mature_146_residues
MEINNNLNYKNIINFDFYKNYLSASNNKSTVNTTTDSIEINETNFNVINTKKAYDAFKEANQGEFGDNSFLYAIIKDMMK
DDGIDVPDFTPNNTTAFLPFIDKMKEYAKNLMTDPNYHQVGGMPLTDEFLDFCDLYKEKLIQYDCK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16932; Mature: 16932

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINNNLNYKNIINFDFYKNYLSASNNKSTVNTTTDSIEINETNFNVINTKKAYDAFKEA
CCCCCCCCCCEEECHHHHHHHHHCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHC
NQGEFGDNSFLYAIIKDMMKDDGIDVPDFTPNNTTAFLPFIDKMKEYAKNLMTDPNYHQV
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC
GGMPLTDEFLDFCDLYKEKLIQYDCK
CCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEINNNLNYKNIINFDFYKNYLSASNNKSTVNTTTDSIEINETNFNVINTKKAYDAFKEA
CCCCCCCCCCEEECHHHHHHHHHCCCCCCEEEECCCEEEEECCCCEEEECHHHHHHHHHC
NQGEFGDNSFLYAIIKDMMKDDGIDVPDFTPNNTTAFLPFIDKMKEYAKNLMTDPNYHQV
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCC
GGMPLTDEFLDFCDLYKEKLIQYDCK
CCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA