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The map label for this gene is 187935158

Identifier: 187935158

GI number: 187935158

Start: 3572127

End: 3572480

Strand: Reverse

Name: 187935158

Synonym: CLL_A3390

Alternate gene names: NA

Gene position: 3572480-3572127 (Counterclockwise)

Preceding gene: 187932991

Following gene: 187932434

Centisome position: 94.0

GC content: 31.07

Gene sequence:

>354_bases
ATGAAAAAAGATGTTAGAGGAATGTTAAATGATTTTATGAATGGGTTAAATACGCTAGGAGAAACTAATGGTGCTAATGT
TGAAGCATTTATGAATCTTCTTGGTACAAACTATGGAGATGGAGCTATTAGTAATAAGACAAAAGAATTAATTAGTGTTG
GTATAGCTACATATAACAGATGTGAATATTGTATAGTATTCCATGCTTTTAAAGCTTTAGAAGCAGGAGCTACTAGAGAA
GAAATAATGGAAGCAGCAATGGTTTCAGTTGCATTTGGTGGAGGCCCAACAATGGCTTATTCAGTAACATTATTAAAAGA
TTCAATTGATGAATTTGAAAAAGATTTTAAATAG

Upstream 100 bases:

>100_bases
TACCACTTTGATGTGGTATTTTTTATACAAAGATACTTGCTATGCTAAGTATTGCTATGTAAAGTAATTAAGAGAATATA
ATTATATGGAGGTTTTTATT

Downstream 100 bases:

>100_bases
TTATTAATTATATATAAATAAAAATATAGGGGTTGTTCATAACATCTAGTTGATTTTATGACAACCTTTTTACATAGAAG
GAGAATTTAAGATGGATATA

Product: alkylhydroperoxidase AhpD domain protein

Products: NA

Alternate protein names: ORF 7 [H]

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKKDVRGMLNDFMNGLNTLGETNGANVEAFMNLLGTNYGDGAISNKTKELISVGIATYNRCEYCIVFHAFKALEAGATRE
EIMEAAMVSVAFGGGPTMAYSVTLLKDSIDEFEKDFK

Sequences:

>Translated_117_residues
MKKDVRGMLNDFMNGLNTLGETNGANVEAFMNLLGTNYGDGAISNKTKELISVGIATYNRCEYCIVFHAFKALEAGATRE
EIMEAAMVSVAFGGGPTMAYSVTLLKDSIDEFEKDFK
>Mature_117_residues
MKKDVRGMLNDFMNGLNTLGETNGANVEAFMNLLGTNYGDGAISNKTKELISVGIATYNRCEYCIVFHAFKALEAGATRE
EIMEAAMVSVAFGGGPTMAYSVTLLKDSIDEFEKDFK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1053 and P.denitrificans COX locus Uncharacterized protein 4 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 12736; Mature: 12736

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDVRGMLNDFMNGLNTLGETNGANVEAFMNLLGTNYGDGAISNKTKELISVGIATYNR
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
CEYCIVFHAFKALEAGATREEIMEAAMVSVAFGGGPTMAYSVTLLKDSIDEFEKDFK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKDVRGMLNDFMNGLNTLGETNGANVEAFMNLLGTNYGDGAISNKTKELISVGIATYNR
CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCC
CEYCIVFHAFKALEAGATREEIMEAAMVSVAFGGGPTMAYSVTLLKDSIDEFEKDFK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2061286 [H]