| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935125
Identifier: 187935125
GI number: 187935125
Start: 2794040
End: 2794702
Strand: Reverse
Name: 187935125
Synonym: CLL_A2679
Alternate gene names: NA
Gene position: 2794702-2794040 (Counterclockwise)
Preceding gene: 187933272
Following gene: 187932613
Centisome position: 73.54
GC content: 29.86
Gene sequence:
>663_bases ATGACATTACTTGATAAATTTAAGAAAGACACAGAAAATAAAAATGCTAATTATGATGTTGTAATGGAGGGGTGGAAGGC TATTGAAGATGCAGCTTTAATCATGTATCCAGGACAGATTGATCCTAAACATTATGGAACACTTATCTCATGGAACTTAG GGGGAAATGATCCTTTAGATGGTATAAGTATTTATGATGGCGGAGAATATTATCATTTTATTACTTATGGTTTATCAGAA CTTTATGAGAAAGAATTTGAAAATAAAGAATATAGCGGATATGGATTTGAATTAACTGTAAAGTTGAAAAAAGATGGATT AGAAGATGAAGAAGCTGGAATTAGGGGAATGTGTGGAATATTACAAGCAATAGCTAGACTAACTTACAATGAAGGTGAAA TTTTTCAGTCAAATGAATACATATATACAGGACAAACTACTGGTATTGATCCTAATGGAGATTCATTAATAACAGGATTT ATCACACAATTAGATAAACTTGGAGAGATTAAAACACCAAATGGAAAGGTACAGTTTGTAGAACTTATTGGAGCAACAGA TGCAGAATTAAAGGCAATTATTGATAAAAAATTAAATGTAAAAGAGTTGTTTGAAAAACTTAATTCAGAATATACAGATT ATAAACGTGAAAGTCTATTTTAA
Upstream 100 bases:
>100_bases TTATCAATAATGGACGAAATTAAAAATATATGACTAAAAATAAATAAAATCAACTAGTGTACAAGCAAGCACACGAGATA TAAAAGAAAGGAAGATAAGA
Downstream 100 bases:
>100_bases TTACTTAAATTAAGATGTTAGCTATAAAATAATTAATAGCTTTATGGAAAATTATATGTAAATAAACTTTTTAATTTATA ATGATTTGGAGATTTAAAAA
Product: BtrU protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTLLDKFKKDTENKNANYDVVMEGWKAIEDAALIMYPGQIDPKHYGTLISWNLGGNDPLDGISIYDGGEYYHFITYGLSE LYEKEFENKEYSGYGFELTVKLKKDGLEDEEAGIRGMCGILQAIARLTYNEGEIFQSNEYIYTGQTTGIDPNGDSLITGF ITQLDKLGEIKTPNGKVQFVELIGATDAELKAIIDKKLNVKELFEKLNSEYTDYKRESLF
Sequences:
>Translated_220_residues MTLLDKFKKDTENKNANYDVVMEGWKAIEDAALIMYPGQIDPKHYGTLISWNLGGNDPLDGISIYDGGEYYHFITYGLSE LYEKEFENKEYSGYGFELTVKLKKDGLEDEEAGIRGMCGILQAIARLTYNEGEIFQSNEYIYTGQTTGIDPNGDSLITGF ITQLDKLGEIKTPNGKVQFVELIGATDAELKAIIDKKLNVKELFEKLNSEYTDYKRESLF >Mature_219_residues TLLDKFKKDTENKNANYDVVMEGWKAIEDAALIMYPGQIDPKHYGTLISWNLGGNDPLDGISIYDGGEYYHFITYGLSEL YEKEFENKEYSGYGFELTVKLKKDGLEDEEAGIRGMCGILQAIARLTYNEGEIFQSNEYIYTGQTTGIDPNGDSLITGFI TQLDKLGEIKTPNGKVQFVELIGATDAELKAIIDKKLNVKELFEKLNSEYTDYKRESLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923479, Length=182, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI296011020, Length=182, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24646369, Length=195, Percent_Identity=33.8461538461538, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24901; Mature: 24770
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDKFKKDTENKNANYDVVMEGWKAIEDAALIMYPGQIDPKHYGTLISWNLGGNDPLD CCHHHHHHHHCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCC GISIYDGGEYYHFITYGLSELYEKEFENKEYSGYGFELTVKLKKDGLEDEEAGIRGMCGI CEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCHHHHHHH LQAIARLTYNEGEIFQSNEYIYTGQTTGIDPNGDSLITGFITQLDKLGEIKTPNGKVQFV HHHHHHHCCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE ELIGATDAELKAIIDKKLNVKELFEKLNSEYTDYKRESLF EEECCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCC >Mature Secondary Structure TLLDKFKKDTENKNANYDVVMEGWKAIEDAALIMYPGQIDPKHYGTLISWNLGGNDPLD CHHHHHHHHCCCCCCCEEEEECCHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCCCC GISIYDGGEYYHFITYGLSELYEKEFENKEYSGYGFELTVKLKKDGLEDEEAGIRGMCGI CEEEEECCCEEEHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHCCHHHHHHH LQAIARLTYNEGEIFQSNEYIYTGQTTGIDPNGDSLITGFITQLDKLGEIKTPNGKVQFV HHHHHHHCCCCCCEEECCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEE ELIGATDAELKAIIDKKLNVKELFEKLNSEYTDYKRESLF EEECCCCHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA