| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is yqkA [H]
Identifier: 187935106
GI number: 187935106
Start: 2237090
End: 2237602
Strand: Reverse
Name: yqkA [H]
Synonym: CLL_A2139
Alternate gene names: 187935106
Gene position: 2237602-2237090 (Counterclockwise)
Preceding gene: 187934114
Following gene: 187932907
Centisome position: 58.88
GC content: 25.34
Gene sequence:
>513_bases ATGATAACTAAACACGTAATAGTAGAAGATTATAATCCAAAATGGAAAGAGAGTTTTGAAAGTATAAAAGATGAATTATT AGCAGTTTTATCTGGAAAAATTATTTCAATTGAGCATATTGGTAGTACATCAGTTGAAGGATTATCAGCAAAGCCAATTA TAGATATTGATATTGTGATTGATAGAAATTTTGATGAAGTTAAAAAAGAATTGGAAACTATTGGCTATATTCATGAAGGC GACTTAGGAATATATGGTAGAGAAGCATTTAAATATTCAAATAAACCACATTTGATGGTACATCATTTATATGTATGTGG TAAAGACAATAAAGAGTTATATCGTCATGTTACTTTTAGAGATTATCTAAGAAAGCATAAAGAAGATAAAGATAGGTATA GTGTTATTAAAAAAAAGATGGCATTAAAATATCCTGAAGATATAAATTCTTATATTAAAGGAAAACAACAAATAATTTTA GAGATATATAAGAAATGTGGATTAGAAAAATAA
Upstream 100 bases:
>100_bases GAAAACGAAATATTTGACCCAAATGATAATACTATAACTCAAAGATATTGGATTAAATTAGTATAGTTAGATAAATTCTA ATTTGGAAGGGAGATTTTTG
Downstream 100 bases:
>100_bases GTTTTAAGTTAAGAGTGAGAGTTATAAATTAACTAAATAAGAGGAGGGCTATATGGATAAGGCTTTATTAGTAATTGATA TGCAAAATTTTTGTGTTGGT
Product: protein YqkA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MITKHVIVEDYNPKWKESFESIKDELLAVLSGKIISIEHIGSTSVEGLSAKPIIDIDIVIDRNFDEVKKELETIGYIHEG DLGIYGREAFKYSNKPHLMVHHLYVCGKDNKELYRHVTFRDYLRKHKEDKDRYSVIKKKMALKYPEDINSYIKGKQQIIL EIYKKCGLEK
Sequences:
>Translated_170_residues MITKHVIVEDYNPKWKESFESIKDELLAVLSGKIISIEHIGSTSVEGLSAKPIIDIDIVIDRNFDEVKKELETIGYIHEG DLGIYGREAFKYSNKPHLMVHHLYVCGKDNKELYRHVTFRDYLRKHKEDKDRYSVIKKKMALKYPEDINSYIKGKQQIIL EIYKKCGLEK >Mature_170_residues MITKHVIVEDYNPKWKESFESIKDELLAVLSGKIISIEHIGSTSVEGLSAKPIIDIDIVIDRNFDEVKKELETIGYIHEG DLGIYGREAFKYSNKPHLMVHHLYVCGKDNKELYRHVTFRDYLRKHKEDKDRYSVIKKKMALKYPEDINSYIKGKQQIIL EIYKKCGLEK
Specific function: Unknown
COG id: COG2320
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 - InterPro: IPR007344 [H]
Pfam domain/function: PF00583 Acetyltransf_1; PF04229 UPF0157 [H]
EC number: NA
Molecular weight: Translated: 19929; Mature: 19929
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKHVIVEDYNPKWKESFESIKDELLAVLSGKIISIEHIGSTSVEGLSAKPIIDIDIVI CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEE DRNFDEVKKELETIGYIHEGDLGIYGREAFKYSNKPHLMVHHLYVCGKDNKELYRHVTFR ECCHHHHHHHHHHHCCEECCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH DYLRKHKEDKDRYSVIKKKMALKYPEDINSYIKGKQQIILEIYKKCGLEK HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MITKHVIVEDYNPKWKESFESIKDELLAVLSGKIISIEHIGSTSVEGLSAKPIIDIDIVI CCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCEEEEEEEE DRNFDEVKKELETIGYIHEGDLGIYGREAFKYSNKPHLMVHHLYVCGKDNKELYRHVTFR ECCHHHHHHHHHHHCCEECCCCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHH DYLRKHKEDKDRYSVIKKKMALKYPEDINSYIKGKQQIILEIYKKCGLEK HHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]