| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is manZ [H]
Identifier: 187935033
GI number: 187935033
Start: 3540648
End: 3541505
Strand: Reverse
Name: manZ [H]
Synonym: CLL_A3357
Alternate gene names: 187935033
Gene position: 3541505-3540648 (Counterclockwise)
Preceding gene: 187935786
Following gene: 187933869
Centisome position: 93.19
GC content: 30.54
Gene sequence:
>858_bases ATGTCAGAATTAAATGTTATGCCTACAAATAAGCCTGTAGAAGATAATGAAATTAAAACTTTAAATAAAATGGATGTAAT AAAATCTTGGATTAGATGGTTTATGTTTGCACAATCAAATTATAATTATGAAAGAATGCAAGCTACATCCTTTGCACATT CAATGTTACCTATTGTAAAGAAATTATATAAAAGTAAAGAGGATAGAAAATCAGCAGTTCAAAGACATTTAGCGTTTTTT AATACTGAACCTATTTGTGGATCTGTAATTCACGGTATAACTATAGCTATGGAAGAAGAAAAATCTAATGGTAAACCAAT AAGTGATGAGGGATTTAATGCTATAAAAACAGGATTAATGGGACCTTTAGCAGGTGTTGGTGATACATTGACACAAGGGA TCATCACACCTATCTTGCTTGCAATATGTATAGGTATTACTAATACAGGAAATGTTGCTGGACCAATAATATTTTTAATA TCACAATTTGCTATAATGGGTGGTATATCATTTAGCTTATGGATGAGTGGGTACAACCTTGGTAAAAAAGCCGTGGAACA AATATTACAAGGTGGAAAAATAAATAAAGTAATTGAAACTGCATCTGTACTTGGTACTCTTGTAATGGGTGGACTTGTTG GTAGATTTGTTGATTTAAAAACTAATATAAGTTTTAATATGGGAGAAGTTGATTTCAGCTTACAGACAGATCTTTTAGAT AAATTAATGCCAGGATTAATACCATTTGCTTTGACATTAATAGTATTACAAATGGTTAAAAAAGGAGTTTCTCCAATTAA AATAATGGGAATACTTATAGGAGCTGGCGCAATTTTAGGAGCTTTAGGTATATTCTAA
Upstream 100 bases:
>100_bases TATCAATAATAGGAATGGTAATTGCATTAACTGTAACTGCTATAAAGAATAGTAATTCTACTTCTAATGCATAAAAGGAA TTTGAGAGGAGGAACTATAA
Downstream 100 bases:
>100_bases TTAACAAGATAGTGATTTTAAATACTATTTAGATTAATAAAAATTTAAATCCTTATGTAATAAAGATATTATCTAAAATA CATAAATTACATTTTAAAGT
Product: PTS system mannose/fructose/sorbose family IID component
Products: protein histidine; sugar phosphate; D-glucosamine-6-phosphate [Cytoplasm]; pyruvate; glucose-6-phosphate [Cytoplasm]; N-acetyl-D-glucosamine-6-phosphate [Cytoplasm]; mannose-6-phosphate [Cytoplasm]; fructose-6-phosphate [Cytoplasm] [C]
Alternate protein names: EII-M-Man; EIID-Man; PTS system mannose-specific EIID component [H]
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSELNVMPTNKPVEDNEIKTLNKMDVIKSWIRWFMFAQSNYNYERMQATSFAHSMLPIVKKLYKSKEDRKSAVQRHLAFF NTEPICGSVIHGITIAMEEEKSNGKPISDEGFNAIKTGLMGPLAGVGDTLTQGIITPILLAICIGITNTGNVAGPIIFLI SQFAIMGGISFSLWMSGYNLGKKAVEQILQGGKINKVIETASVLGTLVMGGLVGRFVDLKTNISFNMGEVDFSLQTDLLD KLMPGLIPFALTLIVLQMVKKGVSPIKIMGILIGAGAILGALGIF
Sequences:
>Translated_285_residues MSELNVMPTNKPVEDNEIKTLNKMDVIKSWIRWFMFAQSNYNYERMQATSFAHSMLPIVKKLYKSKEDRKSAVQRHLAFF NTEPICGSVIHGITIAMEEEKSNGKPISDEGFNAIKTGLMGPLAGVGDTLTQGIITPILLAICIGITNTGNVAGPIIFLI SQFAIMGGISFSLWMSGYNLGKKAVEQILQGGKINKVIETASVLGTLVMGGLVGRFVDLKTNISFNMGEVDFSLQTDLLD KLMPGLIPFALTLIVLQMVKKGVSPIKIMGILIGAGAILGALGIF >Mature_284_residues SELNVMPTNKPVEDNEIKTLNKMDVIKSWIRWFMFAQSNYNYERMQATSFAHSMLPIVKKLYKSKEDRKSAVQRHLAFFN TEPICGSVIHGITIAMEEEKSNGKPISDEGFNAIKTGLMGPLAGVGDTLTQGIITPILLAICIGITNTGNVAGPIIFLIS QFAIMGGISFSLWMSGYNLGKKAVEQILQGGKINKVIETASVLGTLVMGGLVGRFVDLKTNISFNMGEVDFSLQTDLLDK LMPGLIPFALTLIVLQMVKKGVSPIKIMGILIGAGAILGALGIF
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3716
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIID domain [H]
Homologues:
Organism=Escherichia coli, GI1788122, Length=275, Percent_Identity=37.8181818181818, Blast_Score=179, Evalue=2e-46, Organism=Escherichia coli, GI1789529, Length=253, Percent_Identity=33.596837944664, Blast_Score=140, Evalue=1e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004704 - InterPro: IPR018405 [H]
Pfam domain/function: PF03613 EIID-AGA [H]
EC number: NA
Molecular weight: Translated: 30901; Mature: 30770
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS51108 PTS_EIID
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELNVMPTNKPVEDNEIKTLNKMDVIKSWIRWFMFAQSNYNYERMQATSFAHSMLPIVK CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KLYKSKEDRKSAVQRHLAFFNTEPICGSVIHGITIAMEEEKSNGKPISDEGFNAIKTGLM HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHC GPLAGVGDTLTQGIITPILLAICIGITNTGNVAGPIIFLISQFAIMGGISFSLWMSGYNL CCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC GKKAVEQILQGGKINKVIETASVLGTLVMGGLVGRFVDLKTNISFNMGEVDFSLQTDLLD CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH KLMPGLIPFALTLIVLQMVKKGVSPIKIMGILIGAGAILGALGIF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SELNVMPTNKPVEDNEIKTLNKMDVIKSWIRWFMFAQSNYNYERMQATSFAHSMLPIVK CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KLYKSKEDRKSAVQRHLAFFNTEPICGSVIHGITIAMEEEKSNGKPISDEGFNAIKTGLM HHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHC GPLAGVGDTLTQGIITPILLAICIGITNTGNVAGPIIFLISQFAIMGGISFSLWMSGYNL CCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCC GKKAVEQILQGGKINKVIETASVLGTLVMGGLVGRFVDLKTNISFNMGEVDFSLQTDLLD CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH KLMPGLIPFALTLIVLQMVKKGVSPIKIMGILIGAGAILGALGIF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N p -phosphohistidine; sugar; phosphoenolpyruvate; glucosamine [Periplasm]; phosphoenolpyruvate; beta-D-glucose [Periplasm]; N-acetyl-D-glucosamine [Periplasm]; mannose [Periplasm]; fructose [Periplasm] [C]
Specific reaction: protein N p -phosphohistidine + sugar = protein histidine + sugar phosphate phosphoenolpyruvate + glucosamine [Periplasm] = D-glucosamine-6-phosphate [Cytoplasm] + pyruvate phosphoenolpyruvate + beta-D-glucose [Periplasm] = glucose-6-phosphate [Cytoplasm]
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]