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The map label for this gene is ycaM [H]

Identifier: 187935015

GI number: 187935015

Start: 1949011

End: 1950423

Strand: Reverse

Name: ycaM [H]

Synonym: CLL_A1854

Alternate gene names: 187935015

Gene position: 1950423-1949011 (Counterclockwise)

Preceding gene: 187933924

Following gene: 187933765

Centisome position: 51.32

GC content: 29.58

Gene sequence:

>1413_bases
ATGTCAAAAAATAAAGATAAACAGATAATGTGGTACACATTAGCATTTATGGCATTCTCAGCTGTGTGGGGATTTGGAAA
TGTTATAAATGGATTTTCAGAATATGATGGTCTTAAAGCAATTGTATCTTGGATCATAATTTTTGCTATTTATTTCATAC
CATATGCTTTAATGGTAGGGGAGTTAGGTTCAGCATTTAAAGACTATGGTGGCGGAGTTAGTTCATGGATTAACGAAACT
ATAGGACCTAAACTTGCATATTATGCAGGATGGACATACTGGGTAGTACACATGCCTTATATTTCTCAAAAGCCATCTAA
TGTTATGATTGCAACAAGTTGGGCTATTTTTCAAGATAAAAGAATTAGTGCTATGAGCCCTAAAATTATGCAAATAATTT
GCTTGATAATCTTTTTATTTGGACTTTATATTGCATCTAAGGGATTAAATCCATTAAAAAAATTATCTGCGCTTGCTGGT
ACATCAATGTTTGTAATGTCAATTCTATTTATAGTGCTAATGGTAGCAGCACCAGCAATTACAGATGCAAAGCTAAACAC
TATTGATTGGTCTTTTAAAACATTTATGCCTACATTTGATACTAAATTTTTTACTAATTTAGCTATTCTAGTATTTGCAG
TTGGTGGATGCGAAAAGATTTCACCTTATGTTAATGAAATGAAAGATCCAGAAAAAGGATTTTCTAAAGGAATGATTGCT
CTTGCAATGATGGTAGCTGTATGTGCAATTTTAGGAACAGTTTCACTTGGTATGATGTTTGATTCAAATAATGTACCTAA
TGATTTAATGACAAATGGTGCATATTATGCTTTTCAAAAGCTTGGTGAATATTATCATCTTGGAAATTTATTCGTAATTA
TATATGCTATTACAAACCTTATTGGACAATTTGCAGTATTAATTATATCAATTGATGCACCATTACGTATGTTACTTGAT
AGTGCTGATAAGAATTTCATTCCAGAAAAAATGTTTATAAAAAATAAAAATGGGGCTTATAAAAATGGGCACAAATTAAT
ATTAGTAATAGTATCAATATTAATAATAGTTCCAGCTATTGGGATTAAAAATGTTGATGATTTAGTTAAGTGGTTAGTAA
AACTAAATGCAGTTTGTATGCCACTTCGTTATTTATGGGTATTTATTGCTTATATTGCTTTAAAGAAAGCTGGAGAAAAG
TTTAATAGAGAGTACTACTTTGTTAAAAATAATACTGTTGGTATTATTTTTGGAGCTTGGTGCTTTGCATTTACCGCTTT
TGCATGTATTAGTGGTATGTATTCTACAGATATATTTAAATTAATACTTAATATAGTAACACCGTTTATATTAATTGGAT
TAGGTGTTATAATGCCTTATCTTGCTAAAAAAAATAATCAACAAGGATTATAA

Upstream 100 bases:

>100_bases
TGTCGAACACATATACAAACATTGAAATTTAAGCTATTATTTTAATGTAAATCTTAAATTAATGTAAATCTTAAAAAATA
ATAAAAGTAAGGGGAACGTT

Downstream 100 bases:

>100_bases
GAATATAAAAATGTGCTATAAACTAATAACTTAGTTTATAGCACATTTTTTATGATAAAATATTAATCTTGTAATACATT
AATTAATGTATCATAGGAAA

Product: amino acid permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MSKNKDKQIMWYTLAFMAFSAVWGFGNVINGFSEYDGLKAIVSWIIIFAIYFIPYALMVGELGSAFKDYGGGVSSWINET
IGPKLAYYAGWTYWVVHMPYISQKPSNVMIATSWAIFQDKRISAMSPKIMQIICLIIFLFGLYIASKGLNPLKKLSALAG
TSMFVMSILFIVLMVAAPAITDAKLNTIDWSFKTFMPTFDTKFFTNLAILVFAVGGCEKISPYVNEMKDPEKGFSKGMIA
LAMMVAVCAILGTVSLGMMFDSNNVPNDLMTNGAYYAFQKLGEYYHLGNLFVIIYAITNLIGQFAVLIISIDAPLRMLLD
SADKNFIPEKMFIKNKNGAYKNGHKLILVIVSILIIVPAIGIKNVDDLVKWLVKLNAVCMPLRYLWVFIAYIALKKAGEK
FNREYYFVKNNTVGIIFGAWCFAFTAFACISGMYSTDIFKLILNIVTPFILIGLGVIMPYLAKKNNQQGL

Sequences:

>Translated_470_residues
MSKNKDKQIMWYTLAFMAFSAVWGFGNVINGFSEYDGLKAIVSWIIIFAIYFIPYALMVGELGSAFKDYGGGVSSWINET
IGPKLAYYAGWTYWVVHMPYISQKPSNVMIATSWAIFQDKRISAMSPKIMQIICLIIFLFGLYIASKGLNPLKKLSALAG
TSMFVMSILFIVLMVAAPAITDAKLNTIDWSFKTFMPTFDTKFFTNLAILVFAVGGCEKISPYVNEMKDPEKGFSKGMIA
LAMMVAVCAILGTVSLGMMFDSNNVPNDLMTNGAYYAFQKLGEYYHLGNLFVIIYAITNLIGQFAVLIISIDAPLRMLLD
SADKNFIPEKMFIKNKNGAYKNGHKLILVIVSILIIVPAIGIKNVDDLVKWLVKLNAVCMPLRYLWVFIAYIALKKAGEK
FNREYYFVKNNTVGIIFGAWCFAFTAFACISGMYSTDIFKLILNIVTPFILIGLGVIMPYLAKKNNQQGL
>Mature_469_residues
SKNKDKQIMWYTLAFMAFSAVWGFGNVINGFSEYDGLKAIVSWIIIFAIYFIPYALMVGELGSAFKDYGGGVSSWINETI
GPKLAYYAGWTYWVVHMPYISQKPSNVMIATSWAIFQDKRISAMSPKIMQIICLIIFLFGLYIASKGLNPLKKLSALAGT
SMFVMSILFIVLMVAAPAITDAKLNTIDWSFKTFMPTFDTKFFTNLAILVFAVGGCEKISPYVNEMKDPEKGFSKGMIAL
AMMVAVCAILGTVSLGMMFDSNNVPNDLMTNGAYYAFQKLGEYYHLGNLFVIIYAITNLIGQFAVLIISIDAPLRMLLDS
ADKNFIPEKMFIKNKNGAYKNGHKLILVIVSILIIVPAIGIKNVDDLVKWLVKLNAVCMPLRYLWVFIAYIALKKAGEKF
NREYYFVKNNTVGIIFGAWCFAFTAFACISGMYSTDIFKLILNIVTPFILIGLGVIMPYLAKKNNQQGL

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081798, Length=472, Percent_Identity=51.6949152542373, Blast_Score=523, Evalue=1e-149,
Organism=Escherichia coli, GI48994921, Length=442, Percent_Identity=24.8868778280543, Blast_Score=121, Evalue=8e-29,
Organism=Escherichia coli, GI87082380, Length=435, Percent_Identity=23.6781609195402, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787768, Length=364, Percent_Identity=24.4505494505494, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 52515; Mature: 52384

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNKDKQIMWYTLAFMAFSAVWGFGNVINGFSEYDGLKAIVSWIIIFAIYFIPYALMVG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGSAFKDYGGGVSSWINETIGPKLAYYAGWTYWVVHMPYISQKPSNVMIATSWAIFQDK
HHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCEEEEEECCHHCCCCCCEEEEEEEHHHHCC
RISAMSPKIMQIICLIIFLFGLYIASKGLNPLKKLSALAGTSMFVMSILFIVLMVAAPAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
TDAKLNTIDWSFKTFMPTFDTKFFTNLAILVFAVGGCEKISPYVNEMKDPEKGFSKGMIA
CCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCHHHHHHHHHH
LAMMVAVCAILGTVSLGMMFDSNNVPNDLMTNGAYYAFQKLGEYYHLGNLFVIIYAITNL
HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGQFAVLIISIDAPLRMLLDSADKNFIPEKMFIKNKNGAYKNGHKLILVIVSILIIVPAI
HHHHHHHHEECCCHHHHHHHCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCC
GIKNVDDLVKWLVKLNAVCMPLRYLWVFIAYIALKKAGEKFNREYYFVKNNTVGIIFGAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHH
CFAFTAFACISGMYSTDIFKLILNIVTPFILIGLGVIMPYLAKKNNQQGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKNKDKQIMWYTLAFMAFSAVWGFGNVINGFSEYDGLKAIVSWIIIFAIYFIPYALMVG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELGSAFKDYGGGVSSWINETIGPKLAYYAGWTYWVVHMPYISQKPSNVMIATSWAIFQDK
HHHHHHHHHCCCHHHHHHHHCCCCHHHHCCCEEEEEECCHHCCCCCCEEEEEEEHHHHCC
RISAMSPKIMQIICLIIFLFGLYIASKGLNPLKKLSALAGTSMFVMSILFIVLMVAAPAI
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHCCCC
TDAKLNTIDWSFKTFMPTFDTKFFTNLAILVFAVGGCEKISPYVNEMKDPEKGFSKGMIA
CCCCCCEECCHHHHHCCCCCHHHHHHHHHHHHHCCCCHHCCHHHHHCCCCHHHHHHHHHH
LAMMVAVCAILGTVSLGMMFDSNNVPNDLMTNGAYYAFQKLGEYYHLGNLFVIIYAITNL
HHHHHHHHHHHHHHHHHEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGQFAVLIISIDAPLRMLLDSADKNFIPEKMFIKNKNGAYKNGHKLILVIVSILIIVPAI
HHHHHHHHEECCCHHHHHHHCCCCCCCCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCC
GIKNVDDLVKWLVKLNAVCMPLRYLWVFIAYIALKKAGEKFNREYYFVKNNTVGIIFGAW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEHHHHH
CFAFTAFACISGMYSTDIFKLILNIVTPFILIGLGVIMPYLAKKNNQQGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]