| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934820
Identifier: 187934820
GI number: 187934820
Start: 1548654
End: 1549085
Strand: Reverse
Name: 187934820
Synonym: CLL_A1494
Alternate gene names: NA
Gene position: 1549085-1548654 (Counterclockwise)
Preceding gene: 187933931
Following gene: 187932859
Centisome position: 40.76
GC content: 22.22
Gene sequence:
>432_bases ATGAAAAAATGTTATTTTATAGTCTTATCTATAATTATTTTATCAATTATCTTAATATACTGCTTTTATACTAGAAAAAC TACCATAGGGAATGTTGTATCTACTAATTGTAATTTAGAAACTATTTATAAACTTTATATTAGAGGTGTTAATTCTGGAA ATGAACAGAATTTTAAAAGCAAAGCTGAAATAAATGAAATTTTATCCTACATTTCTAATACAGAAATTATTAGGTACTTT GGAGATACATCTAAAAATAGAACTAAAGGGTCTTTTGAGATATATCTTTATGAAAATTCAGATGATATTTTATGTATTTA TACTCTAGGCAAAGAATATTTAATTATTTACTCTAAAGATAATTCAAGTAAAACATATAAAGTAATTGATGATAACTTTG ACCGTGATTATATGAATAAAGTACTCTCTTAA
Upstream 100 bases:
>100_bases ATTCCTCTATATTATAATACCTTTTGTTAAATTATAACATATTTTTCTGTTTGTGTTATAATTTAGCAAAATATTAAATT TATATTTAGGAGTAATAATT
Downstream 100 bases:
>100_bases TTTTCTTTAGTTTAATCAAAAATTAAATAGAGGCTTTATATGAGATGAATCTTTATAAAAAAATTTCTTATTAATTAATG AAATTTAATGCTACTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKKCYFIVLSIIILSIILIYCFYTRKTTIGNVVSTNCNLETIYKLYIRGVNSGNEQNFKSKAEINEILSYISNTEIIRYF GDTSKNRTKGSFEIYLYENSDDILCIYTLGKEYLIIYSKDNSSKTYKVIDDNFDRDYMNKVLS
Sequences:
>Translated_143_residues MKKCYFIVLSIIILSIILIYCFYTRKTTIGNVVSTNCNLETIYKLYIRGVNSGNEQNFKSKAEINEILSYISNTEIIRYF GDTSKNRTKGSFEIYLYENSDDILCIYTLGKEYLIIYSKDNSSKTYKVIDDNFDRDYMNKVLS >Mature_143_residues MKKCYFIVLSIIILSIILIYCFYTRKTTIGNVVSTNCNLETIYKLYIRGVNSGNEQNFKSKAEINEILSYISNTEIIRYF GDTSKNRTKGSFEIYLYENSDDILCIYTLGKEYLIIYSKDNSSKTYKVIDDNFDRDYMNKVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16732; Mature: 16732
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKCYFIVLSIIILSIILIYCFYTRKTTIGNVVSTNCNLETIYKLYIRGVNSGNEQNFKS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCH KAEINEILSYISNTEIIRYFGDTSKNRTKGSFEIYLYENSDDILCIYTLGKEYLIIYSKD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECC NSSKTYKVIDDNFDRDYMNKVLS CCCCEEEEECCCCCHHHHHHHCC >Mature Secondary Structure MKKCYFIVLSIIILSIILIYCFYTRKTTIGNVVSTNCNLETIYKLYIRGVNSGNEQNFKS CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCH KAEINEILSYISNTEIIRYFGDTSKNRTKGSFEIYLYENSDDILCIYTLGKEYLIIYSKD HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEECCCEEEEEEECC NSSKTYKVIDDNFDRDYMNKVLS CCCCEEEEECCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA