Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is ulaA [H]

Identifier: 187934780

GI number: 187934780

Start: 3426023

End: 3427480

Strand: Reverse

Name: ulaA [H]

Synonym: CLL_A3265

Alternate gene names: 187934780

Gene position: 3427480-3426023 (Counterclockwise)

Preceding gene: 187934987

Following gene: 187933984

Centisome position: 90.19

GC content: 31.21

Gene sequence:

>1458_bases
ATGGATTTTTTACTATCAATATGGGAATTCTTTCAGATAAATATTTTAACTAATCCAGCATTTTTTATAGGATTTATAGT
ACTTATAGGTTACTTATTACTAAGAAGACCACTATATGAAGCTATTGCAGGATTTATAAAGGCAGTAGTTGGTTATTTGA
TACTTAATGTGGCAGCTGGAGGATTAGTTAATAATTTCCGTCCAATATTAGCTGGATTAAAAGATCGTTTTAATTTAACA
GCAGCAGTTATAGATCCATACTTTGGACAGACCGCAGCACAATCAGCAGTAGAAAGTGTCGGTAGATCATTTTCACTTAT
GATGATAGTACTTTTAATAGCATTTATTTTTAACATAGTATTGGTTTTATTTAGAAAACAAACAAAGATAAGAACTGTAT
TTATTACAGGACACATAATGGTACAACAATCATCAACAGCTTTATGGATAGTACTATTTTGTTTCCCAGAAATAATTGAT
ACACAGGCAGTAATTATGCTTGGTTTATTACTAGGAACATATTGGGCCGTATCATCAAACCTTACAGTTGAAGCAACTCA
AGACCTAACAGAAGGTGGAGGATTTGCAATTGGGCATCAACAAATGTTTGGTATTTGGTTAACAGATAAGTTTGCAGGAA
AGATTGGTAATAAAGAAAAATCAATAGAACATTTAAAATTACCTGGATTCTTATCAATATTTAACGATAATGTAGTAGCA
ACTGGTATATTAATGATGTTTTTCTTCGGAATAATCATGGGAATATTAGGACCTGATTTATTACATCAAATAGATAAAGG
ATTTAATGCAGATAGAAACTTTATATTTTATATAATGGAAAAATCATTAAACTTTGCAGTTTACTTAAGTATATTACAAC
TTGGAGTTAAGATGTTCGTTTCAGAACTTACTGAATCATTCCAAGGTATTTCAAATAAACTTTTACCAGGTTCAATGCCA
GCAGTAGATTGTGCTGCAACTTATGGATTTGGACATGCTAATGCAGTAACAATTGGATTCTTATTTGGTGCATTAGGACA
ATTTATATCAATAATAGGATTAATAGTATTTAAGAGTCCAGTACTAATAATAACAGGTTTCGTACCAGTATTCTTTGATA
ATGCAACATTTGCAGTTTATGCAAATAAAAAAGGTGGGTTAAAAGCTGCAATGATAATTCCTTTCATATCTGGGGTAATT
CAAGTGCTAGGAGGAGCATTTGCAGCATACTACTTTGGATTAGCACAATTTGGTGGATGGCATGGAAACTTTGACTTTGC
AACAGTATGGCCATTAATCGGTGTATTAATGAATAATCTACATTATGTAGGATTTGGAATAGCACTAGTTGCACTATTAG
TCATACCACAACTTCAGTATAGAAAAAATAAAAAAGGATACTTTAAAATAGCAGAAGATTATGATGAATATCTTAATGAA
AAGGGATTGGAAGCTTAG

Upstream 100 bases:

>100_bases
TTATAATTAAAATTACTAACAAAACCCTAAATTAATTCCATAACAACTTAAATAAATCTAAATATAATAATTTTTATTAA
ATTTTTAAGGGGGAATTTAA

Downstream 100 bases:

>100_bases
TATAAAACAATTTTAAAGTTTAGCTAGAGTTTAAATGTTTAGGAAAAAATACTCTAGTAAAGTTTTAAGATACTAATAAT
ATAATTTTTAACCAATCAAA

Product: PTS system ascorbate-specific transporter subunit IIC

Products: NA

Alternate protein names: Ascorbate-specific PTS system EIIC component [H]

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT
AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID
TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA
TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP
AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI
QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE
KGLEA

Sequences:

>Translated_485_residues
MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT
AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID
TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA
TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP
AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI
QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE
KGLEA
>Mature_485_residues
MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT
AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID
TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA
TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP
AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI
QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE
KGLEA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3037

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ulaA family [H]

Homologues:

Organism=Escherichia coli, GI87082388, Length=481, Percent_Identity=36.1746361746362, Blast_Score=300, Evalue=2e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004703 [H]

Pfam domain/function: PF03611 EIIC-GAT [H]

EC number: NA

Molecular weight: Translated: 53441; Mature: 53441

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAG
CCHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVNNFRPILAGLKDRFNLTAAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIV
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIIDTQAVIMLGLLLGTYWAVSSN
HHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA
CEEEEHHHHCCCCCEEECCHHHEEEEEEHHHHHCCCCCHHCHHHHCCCCHHHHHCCCHHH
TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFV
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
SELTESFQGISNKLLPGSMPAVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSP
HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVIQVLGGAFAAYYFGLAQFGGW
HHEEECCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHH
KGLEA
CCCCC
>Mature Secondary Structure
MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAG
CCHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLVNNFRPILAGLKDRFNLTAAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIV
HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIIDTQAVIMLGLLLGTYWAVSSN
HHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
LTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA
CEEEEHHHHCCCCCEEECCHHHEEEEEEHHHHHCCCCCHHCHHHHCCCCHHHHHCCCHHH
TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFV
HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
SELTESFQGISNKLLPGSMPAVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSP
HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
VLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVIQVLGGAFAAYYFGLAQFGGW
HHEEECCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE
CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHH
KGLEA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]