| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ulaA [H]
Identifier: 187934780
GI number: 187934780
Start: 3426023
End: 3427480
Strand: Reverse
Name: ulaA [H]
Synonym: CLL_A3265
Alternate gene names: 187934780
Gene position: 3427480-3426023 (Counterclockwise)
Preceding gene: 187934987
Following gene: 187933984
Centisome position: 90.19
GC content: 31.21
Gene sequence:
>1458_bases ATGGATTTTTTACTATCAATATGGGAATTCTTTCAGATAAATATTTTAACTAATCCAGCATTTTTTATAGGATTTATAGT ACTTATAGGTTACTTATTACTAAGAAGACCACTATATGAAGCTATTGCAGGATTTATAAAGGCAGTAGTTGGTTATTTGA TACTTAATGTGGCAGCTGGAGGATTAGTTAATAATTTCCGTCCAATATTAGCTGGATTAAAAGATCGTTTTAATTTAACA GCAGCAGTTATAGATCCATACTTTGGACAGACCGCAGCACAATCAGCAGTAGAAAGTGTCGGTAGATCATTTTCACTTAT GATGATAGTACTTTTAATAGCATTTATTTTTAACATAGTATTGGTTTTATTTAGAAAACAAACAAAGATAAGAACTGTAT TTATTACAGGACACATAATGGTACAACAATCATCAACAGCTTTATGGATAGTACTATTTTGTTTCCCAGAAATAATTGAT ACACAGGCAGTAATTATGCTTGGTTTATTACTAGGAACATATTGGGCCGTATCATCAAACCTTACAGTTGAAGCAACTCA AGACCTAACAGAAGGTGGAGGATTTGCAATTGGGCATCAACAAATGTTTGGTATTTGGTTAACAGATAAGTTTGCAGGAA AGATTGGTAATAAAGAAAAATCAATAGAACATTTAAAATTACCTGGATTCTTATCAATATTTAACGATAATGTAGTAGCA ACTGGTATATTAATGATGTTTTTCTTCGGAATAATCATGGGAATATTAGGACCTGATTTATTACATCAAATAGATAAAGG ATTTAATGCAGATAGAAACTTTATATTTTATATAATGGAAAAATCATTAAACTTTGCAGTTTACTTAAGTATATTACAAC TTGGAGTTAAGATGTTCGTTTCAGAACTTACTGAATCATTCCAAGGTATTTCAAATAAACTTTTACCAGGTTCAATGCCA GCAGTAGATTGTGCTGCAACTTATGGATTTGGACATGCTAATGCAGTAACAATTGGATTCTTATTTGGTGCATTAGGACA ATTTATATCAATAATAGGATTAATAGTATTTAAGAGTCCAGTACTAATAATAACAGGTTTCGTACCAGTATTCTTTGATA ATGCAACATTTGCAGTTTATGCAAATAAAAAAGGTGGGTTAAAAGCTGCAATGATAATTCCTTTCATATCTGGGGTAATT CAAGTGCTAGGAGGAGCATTTGCAGCATACTACTTTGGATTAGCACAATTTGGTGGATGGCATGGAAACTTTGACTTTGC AACAGTATGGCCATTAATCGGTGTATTAATGAATAATCTACATTATGTAGGATTTGGAATAGCACTAGTTGCACTATTAG TCATACCACAACTTCAGTATAGAAAAAATAAAAAAGGATACTTTAAAATAGCAGAAGATTATGATGAATATCTTAATGAA AAGGGATTGGAAGCTTAG
Upstream 100 bases:
>100_bases TTATAATTAAAATTACTAACAAAACCCTAAATTAATTCCATAACAACTTAAATAAATCTAAATATAATAATTTTTATTAA ATTTTTAAGGGGGAATTTAA
Downstream 100 bases:
>100_bases TATAAAACAATTTTAAAGTTTAGCTAGAGTTTAAATGTTTAGGAAAAAATACTCTAGTAAAGTTTTAAGATACTAATAAT ATAATTTTTAACCAATCAAA
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE KGLEA
Sequences:
>Translated_485_residues MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE KGLEA >Mature_485_residues MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAGGLVNNFRPILAGLKDRFNLT AAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIVLVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIID TQAVIMLGLLLGTYWAVSSNLTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFVSELTESFQGISNKLLPGSMP AVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSPVLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVI QVLGGAFAAYYFGLAQFGGWHGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE KGLEA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=481, Percent_Identity=36.1746361746362, Blast_Score=300, Evalue=2e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 53441; Mature: 53441
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAG CCHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLVNNFRPILAGLKDRFNLTAAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIV HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIIDTQAVIMLGLLLGTYWAVSSN HHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA CEEEEHHHHCCCCCEEECCHHHEEEEEEHHHHHCCCCCHHCHHHHCCCCHHHHHCCCHHH TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFV HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH SELTESFQGISNKLLPGSMPAVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSP HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVIQVLGGAFAAYYFGLAQFGGW HHEEECCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHH KGLEA CCCCC >Mature Secondary Structure MDFLLSIWEFFQINILTNPAFFIGFIVLIGYLLLRRPLYEAIAGFIKAVVGYLILNVAAG CCHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLVNNFRPILAGLKDRFNLTAAVIDPYFGQTAAQSAVESVGRSFSLMMIVLLIAFIFNIV HHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LVLFRKQTKIRTVFITGHIMVQQSSTALWIVLFCFPEIIDTQAVIMLGLLLGTYWAVSSN HHHHCCCCCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC LTVEATQDLTEGGGFAIGHQQMFGIWLTDKFAGKIGNKEKSIEHLKLPGFLSIFNDNVVA CEEEEHHHHCCCCCEEECCHHHEEEEEEHHHHHCCCCCHHCHHHHCCCCHHHHHCCCHHH TGILMMFFFGIIMGILGPDLLHQIDKGFNADRNFIFYIMEKSLNFAVYLSILQLGVKMFV HHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH SELTESFQGISNKLLPGSMPAVDCAATYGFGHANAVTIGFLFGALGQFISIIGLIVFKSP HHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC VLIITGFVPVFFDNATFAVYANKKGGLKAAMIIPFISGVIQVLGGAFAAYYFGLAQFGGW HHEEECCHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HGNFDFATVWPLIGVLMNNLHYVGFGIALVALLVIPQLQYRKNKKGYFKIAEDYDEYLNE CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEHHHHHHHHHH KGLEA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]