| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934735
Identifier: 187934735
GI number: 187934735
Start: 1613830
End: 1614252
Strand: Reverse
Name: 187934735
Synonym: CLL_A1558
Alternate gene names: NA
Gene position: 1614252-1613830 (Counterclockwise)
Preceding gene: 187932816
Following gene: 187935718
Centisome position: 42.48
GC content: 25.77
Gene sequence:
>423_bases ATGTATAATTTATTATCTTTATTAATCGGTGTACTTATTGCATTTATGATTGTTTGTAATGGAGAGTTATCTGCTGGTGT TGGGAATTATTCTTCATTAGTAATAATTCATATTTTAGGTTATTTGGCTCTAGTTATAATTATGCTTTATAAAAAAATAA AAATTCCATTTAAAATGCACTTACCATTATATCTTTATAGTGCAGGTGCTCTTAGTATTTTTACAATACTATTTAACAAT ATAACATTTTCTATTATTGGAGTATCGTTGCCTGTTGCATTAGGACTTTTAGGGCAAACATTAACCTCAATGGTATTTGA TCAATATGGACTATTAGGAATGCAAAAAATTAAATTTAATAAGAAGAAGTTAATAGGCATTACAATAATAACAATTGGTG TCTGTATTATGACTTTCTTTTAA
Upstream 100 bases:
>100_bases TAATTTTAAAATAAACATGACATATGTCCTACAGTATTCCCTTTATAATAGCTTAAACTAAATTTAGAAATCAAGAATTC TATTTTTATAAGGAGAAATT
Downstream 100 bases:
>100_bases CTAAAAGGAGGACGTTTTATGTTTTATATATTAATGTCTATATTAACCGGTGTTATTATAGTAATCTGTAGAATCTTAAA TACAAAACTTTCTGAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MYNLLSLLIGVLIAFMIVCNGELSAGVGNYSSLVIIHILGYLALVIIMLYKKIKIPFKMHLPLYLYSAGALSIFTILFNN ITFSIIGVSLPVALGLLGQTLTSMVFDQYGLLGMQKIKFNKKKLIGITIITIGVCIMTFF
Sequences:
>Translated_140_residues MYNLLSLLIGVLIAFMIVCNGELSAGVGNYSSLVIIHILGYLALVIIMLYKKIKIPFKMHLPLYLYSAGALSIFTILFNN ITFSIIGVSLPVALGLLGQTLTSMVFDQYGLLGMQKIKFNKKKLIGITIITIGVCIMTFF >Mature_140_residues MYNLLSLLIGVLIAFMIVCNGELSAGVGNYSSLVIIHILGYLALVIIMLYKKIKIPFKMHLPLYLYSAGALSIFTILFNN ITFSIIGVSLPVALGLLGQTLTSMVFDQYGLLGMQKIKFNKKKLIGITIITIGVCIMTFF
Specific function: Unknown
COG id: COG3238
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15399; Mature: 15399
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLLSLLIGVLIAFMIVCNGELSAGVGNYSSLVIIHILGYLALVIIMLYKKIKIPFKMH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC LPLYLYSAGALSIFTILFNNITFSIIGVSLPVALGLLGQTLTSMVFDQYGLLGMQKIKFN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC KKKLIGITIITIGVCIMTFF CHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYNLLSLLIGVLIAFMIVCNGELSAGVGNYSSLVIIHILGYLALVIIMLYKKIKIPFKMH CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC LPLYLYSAGALSIFTILFNNITFSIIGVSLPVALGLLGQTLTSMVFDQYGLLGMQKIKFN CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC KKKLIGITIITIGVCIMTFF CHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA