| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934710
Identifier: 187934710
GI number: 187934710
Start: 2730858
End: 2731628
Strand: Reverse
Name: 187934710
Synonym: CLL_A2622
Alternate gene names: NA
Gene position: 2731628-2730858 (Counterclockwise)
Preceding gene: 187932632
Following gene: 187933609
Centisome position: 71.88
GC content: 26.33
Gene sequence:
>771_bases ATGGAAAAGAATAATTTGTACTTTTTAAGAATAGGGTTGAAGAATTTAATTATAGTAATACCTATTCTATGTGTACTTAC ATTTGGCATCTATAAAAATATTGTAGAGGGAAATATTCAAGAAGGTATTTTTATAATTATTTCTATAGTATTTGCAATCG GATTTTTTTATTTTAAAAGGAATAAAAGTAACGAATACATAAATAGAGGATTTCAATATGAAACTTCTAAAGAATTATTA AAGTATTATGATAATGTTTTTAGTAAACATATTACAAATATAAGTGATCAAGATGCTTGGTTAACATATTCCAAATGTTT AGTATGTTGCTATTATGGAGAATTTGACAAAGCTATGCAAATACTAAATGGGATAAACTGGAGTAGCAAAAGCCCATATA TTCAATCACTGGAGCTATCAATAAAAGCTTTAATGTGTTATCTGCAGTCTAAAGACTATAAGGAAGGTTTAAGATTATCA ATGTTGTCACAACAGTTAGGACATGCATCTAATAATATTTCTGGCAATAAAAAAACTCAAAGCTTTTACGAATCATATAT ATTAGTAGGTGAATTATTAAATGGAAATATAGAAAGTAATATAATCGTATCTTTGGAAGGTAAGTACAATGAATCTCCAG TGCTTGTTAAACTTTTAATTGGGCATTGTCTTTCAAAAGTATATATTAAAATGAATATGAAAGAAAAAGCTGAAGAAAAA ATTCGATTCTGTAAAAAAATCGCACCACATTGTGGACCACTATTTAATTAA
Upstream 100 bases:
>100_bases ATTTATAATAGTAAATAATTACATAATGTGTAAAGTTAATAGTTAAACTTAATATCAATAGGAATTAATCTTAAATATGA TTTTAAATGGGGGATATAGA
Downstream 100 bases:
>100_bases ACAATGGTCTTCTCATAAGCAAAATTTTATTAATATGTAAACTTATTTTATCATGAACCAATAAAATAAATAACGTATTA AAAAATCGCATTATTCAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MEKNNLYFLRIGLKNLIIVIPILCVLTFGIYKNIVEGNIQEGIFIIISIVFAIGFFYFKRNKSNEYINRGFQYETSKELL KYYDNVFSKHITNISDQDAWLTYSKCLVCCYYGEFDKAMQILNGINWSSKSPYIQSLELSIKALMCYLQSKDYKEGLRLS MLSQQLGHASNNISGNKKTQSFYESYILVGELLNGNIESNIIVSLEGKYNESPVLVKLLIGHCLSKVYIKMNMKEKAEEK IRFCKKIAPHCGPLFN
Sequences:
>Translated_256_residues MEKNNLYFLRIGLKNLIIVIPILCVLTFGIYKNIVEGNIQEGIFIIISIVFAIGFFYFKRNKSNEYINRGFQYETSKELL KYYDNVFSKHITNISDQDAWLTYSKCLVCCYYGEFDKAMQILNGINWSSKSPYIQSLELSIKALMCYLQSKDYKEGLRLS MLSQQLGHASNNISGNKKTQSFYESYILVGELLNGNIESNIIVSLEGKYNESPVLVKLLIGHCLSKVYIKMNMKEKAEEK IRFCKKIAPHCGPLFN >Mature_256_residues MEKNNLYFLRIGLKNLIIVIPILCVLTFGIYKNIVEGNIQEGIFIIISIVFAIGFFYFKRNKSNEYINRGFQYETSKELL KYYDNVFSKHITNISDQDAWLTYSKCLVCCYYGEFDKAMQILNGINWSSKSPYIQSLELSIKALMCYLQSKDYKEGLRLS MLSQQLGHASNNISGNKKTQSFYESYILVGELLNGNIESNIIVSLEGKYNESPVLVKLLIGHCLSKVYIKMNMKEKAEEK IRFCKKIAPHCGPLFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29515; Mature: 29515
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNNLYFLRIGLKNLIIVIPILCVLTFGIYKNIVEGNIQEGIFIIISIVFAIGFFYFKR CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC NKSNEYINRGFQYETSKELLKYYDNVFSKHITNISDQDAWLTYSKCLVCCYYGEFDKAMQ CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHH ILNGINWSSKSPYIQSLELSIKALMCYLQSKDYKEGLRLSMLSQQLGHASNNISGNKKTQ HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH SFYESYILVGELLNGNIESNIIVSLEGKYNESPVLVKLLIGHCLSKVYIKMNMKEKAEEK HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH IRFCKKIAPHCGPLFN HHHHHHHCCCCCCCCC >Mature Secondary Structure MEKNNLYFLRIGLKNLIIVIPILCVLTFGIYKNIVEGNIQEGIFIIISIVFAIGFFYFKR CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC NKSNEYINRGFQYETSKELLKYYDNVFSKHITNISDQDAWLTYSKCLVCCYYGEFDKAMQ CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHH ILNGINWSSKSPYIQSLELSIKALMCYLQSKDYKEGLRLSMLSQQLGHASNNISGNKKTQ HHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHH SFYESYILVGELLNGNIESNIIVSLEGKYNESPVLVKLLIGHCLSKVYIKMNMKEKAEEK HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH IRFCKKIAPHCGPLFN HHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA