Click here to switch to the map view.

The map label for this gene is yjcM [H]

Identifier: 187934700

GI number: 187934700

Start: 1325836

End: 1326858

Strand: Reverse

Name: yjcM [H]

Synonym: CLL_A1293

Alternate gene names: 187934700

Gene position: 1326858-1325836 (Counterclockwise)

Preceding gene: 187934785

Following gene: 187935768

Centisome position: 34.91

GC content: 24.34

Gene sequence:

>1023_bases
ATGATTTATAAAAAATTACTCTCCTTGGGCGGTGATATATTGTTATCAATAGATTTATACTATTTCTATAAAATTTTATC
TACTCCATATGATAAATTCAATTTAATTCAAAAAGAAAAATGTAATACAAACGACAATATTTTTGAAGATTTATATTTGA
AAAAGTGCTTTAATTCTTTATGGCTAAAAAAATTGAACTTACAAATAAATAATATAAAGACCAAATATAAATTTAACATA
ATTGAAAAGAATCATAACTTACTTAAAATAAAATTTAACTACCTAAAATCCTTTACTTTAAACAATTCACCCAAAGGTAT
ACTCTCATGTTCATTAGAGGAATATATACTTATATTAAATAAAAGTAATCACAAATTTAAAATATTATTTTTAATTAATA
AGGAAGAAGATCCTAATTTATATGAAGATATACTAAAAAAAGATTTACTACAAATAACTAATGTTATTTCCTCTAATAAA
ATAGGTATTTGGAGTTCTAAAATAAAGGTTTTAGAACGTCTATATAAAAAATATCTAGAAAGTAATAATTGTTACAGAAC
ACCTTATACTTCTGATAGAAGTTTTTCTTATGATCCATTAAAAGCTTGTCAATATGCCGAAAAATTTGCGTTGATTCCTA
ATAAAGATTATACCTCCTTTGAGGGTATAGGTGGAGATTGTACTAACTTTATTTCTCAATCAATTCATTTTGGAGGGCTA
AAGACTTCAACCTCATGGAACCCTTATAGTAATGCTTGGGTTAGAGTTGAAGAATTATATTCATATATTATAAAAAATAA
ACTTGGATTTGAAATTAATAAAACTTCACCTTTAAAGAAAGGTACTATAGTACAATTTTATACGCCTAAAATAGGTAGGT
TTTTTCATTCTGGAATAATAACCCACATTCTCCCAGATGGAGATTACCTTTATTGTTGCCATAGCTATAACAAATTAAAT
TATCCTTTAAGTTTAACCTATCCTATATTATATCCTAGAATAAGAAACCTAGAAATATACTAA

Upstream 100 bases:

>100_bases
GAACCACTTAATTATATTAAAATATATATTTTAATACTTTTTAGCAATATCTATAAACTTTATTCATATATATCTGTAAA
CGTATTTTTATAAATTAATT

Downstream 100 bases:

>100_bases
AAACAATTCTTAATTTTGCACTCTATTTTAAATATTTACTAAATCAAATAGTATTCCGATTAGATTTCTAAATAATATAG
GATACCTTAGAATTATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MIYKKLLSLGGDILLSIDLYYFYKILSTPYDKFNLIQKEKCNTNDNIFEDLYLKKCFNSLWLKKLNLQINNIKTKYKFNI
IEKNHNLLKIKFNYLKSFTLNNSPKGILSCSLEEYILILNKSNHKFKILFLINKEEDPNLYEDILKKDLLQITNVISSNK
IGIWSSKIKVLERLYKKYLESNNCYRTPYTSDRSFSYDPLKACQYAEKFALIPNKDYTSFEGIGGDCTNFISQSIHFGGL
KTSTSWNPYSNAWVRVEELYSYIIKNKLGFEINKTSPLKKGTIVQFYTPKIGRFFHSGIITHILPDGDYLYCCHSYNKLN
YPLSLTYPILYPRIRNLEIY

Sequences:

>Translated_340_residues
MIYKKLLSLGGDILLSIDLYYFYKILSTPYDKFNLIQKEKCNTNDNIFEDLYLKKCFNSLWLKKLNLQINNIKTKYKFNI
IEKNHNLLKIKFNYLKSFTLNNSPKGILSCSLEEYILILNKSNHKFKILFLINKEEDPNLYEDILKKDLLQITNVISSNK
IGIWSSKIKVLERLYKKYLESNNCYRTPYTSDRSFSYDPLKACQYAEKFALIPNKDYTSFEGIGGDCTNFISQSIHFGGL
KTSTSWNPYSNAWVRVEELYSYIIKNKLGFEINKTSPLKKGTIVQFYTPKIGRFFHSGIITHILPDGDYLYCCHSYNKLN
YPLSLTYPILYPRIRNLEIY
>Mature_340_residues
MIYKKLLSLGGDILLSIDLYYFYKILSTPYDKFNLIQKEKCNTNDNIFEDLYLKKCFNSLWLKKLNLQINNIKTKYKFNI
IEKNHNLLKIKFNYLKSFTLNNSPKGILSCSLEEYILILNKSNHKFKILFLINKEEDPNLYEDILKKDLLQITNVISSNK
IGIWSSKIKVLERLYKKYLESNNCYRTPYTSDRSFSYDPLKACQYAEKFALIPNKDYTSFEGIGGDCTNFISQSIHFGGL
KTSTSWNPYSNAWVRVEELYSYIIKNKLGFEINKTSPLKKGTIVQFYTPKIGRFFHSGIITHILPDGDYLYCCHSYNKLN
YPLSLTYPILYPRIRNLEIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40027; Mature: 40027

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKKLLSLGGDILLSIDLYYFYKILSTPYDKFNLIQKEKCNTNDNIFEDLYLKKCFNSL
CHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH
WLKKLNLQINNIKTKYKFNIIEKNHNLLKIKFNYLKSFTLNNSPKGILSCSLEEYILILN
HHHHHCEEEECEEEEEEEEEEECCCCEEEEEEEHEEEEECCCCCCCEEEECHHHEEEEEE
KSNHKFKILFLINKEEDPNLYEDILKKDLLQITNVISSNKIGIWSSKIKVLERLYKKYLE
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
SNNCYRTPYTSDRSFSYDPLKACQYAEKFALIPNKDYTSFEGIGGDCTNFISQSIHFGGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCE
KTSTSWNPYSNAWVRVEELYSYIIKNKLGFEINKTSPLKKGTIVQFYTPKIGRFFHSGII
ECCCCCCCCCCCEEEHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCHHHHHHHHCCC
THILPDGDYLYCCHSYNKLNYPLSLTYPILYPRIRNLEIY
EEEECCCCEEEEEECCCCCCCCEEEECCEECCCCCCEECC
>Mature Secondary Structure
MIYKKLLSLGGDILLSIDLYYFYKILSTPYDKFNLIQKEKCNTNDNIFEDLYLKKCFNSL
CHHHHHHHCCCCEEEEHHHHHHHHHHCCCCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH
WLKKLNLQINNIKTKYKFNIIEKNHNLLKIKFNYLKSFTLNNSPKGILSCSLEEYILILN
HHHHHCEEEECEEEEEEEEEEECCCCEEEEEEEHEEEEECCCCCCCEEEECHHHEEEEEE
KSNHKFKILFLINKEEDPNLYEDILKKDLLQITNVISSNKIGIWSSKIKVLERLYKKYLE
CCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHC
SNNCYRTPYTSDRSFSYDPLKACQYAEKFALIPNKDYTSFEGIGGDCTNFISQSIHFGGL
CCCCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCE
KTSTSWNPYSNAWVRVEELYSYIIKNKLGFEINKTSPLKKGTIVQFYTPKIGRFFHSGII
ECCCCCCCCCCCEEEHHHHHHHHHHHCCCCEECCCCCCCCCCEEEEECCHHHHHHHHCCC
THILPDGDYLYCCHSYNKLNYPLSLTYPILYPRIRNLEIY
EEEECCCCEEEEEECCCCCCCCEEEECCEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]