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The map label for this gene is ybcS [C]

Identifier: 187934624

GI number: 187934624

Start: 2330688

End: 2331488

Strand: Reverse

Name: ybcS [C]

Synonym: CLL_A2241

Alternate gene names: 187934624

Gene position: 2331488-2330688 (Counterclockwise)

Preceding gene: 187935156

Following gene: 187934450

Centisome position: 61.35

GC content: 31.96

Gene sequence:

>801_bases
ATGTCACAATGGAAATGGTGTGTAGAAGATTCTACAGGAAATATTACTAAAGGGTGGTATGAAGATAACTCGAAGTGGTA
CTACTTAAAGGATAATGGAACTATGGCTACTGGTTGGATTGAGGATAAAGATGGTCGCTGGTATTACTTAGATGAAAGTG
GAGCAATGAAAACAGGATGGTTAAAAAGCCCTTATAGTAGTAAATGGTTTTATTTGAATCCTGTAAGTAATGGTTATATG
GGTGCCATGTATACGGAAGGTACTTATATAATAGAAGGAAACGAATATAAGTTTGATAAAGAAGGAGCATGGATAGAAGA
TAATTATTTGGTATCTGATTCATGTATTGATTTTATAAAATTATGGGAAGGTTTCCCCGAAGAAGGCCGAAAATATTATG
ATATGGTTGGAGTTTTAACACAAGGATATGGAATGACTGGTAAAGAAATAGAAAATTTACCTGACCAAATATCTGAATAT
GAAGCTACTAAATTATTAAAAGAATGGATCAACAAAAAGTATGCTCCAGTAATAAAAAAAGATTTAGACTCTAAAGGCAT
ATGTTTGAAGCAAAATGAGTTTGATTCATTAGTAAGCTTTGCATATAATTGTGGAACTAGTGGTCTTTTAGGTTCAACAT
TATATAGAAATATTGTTGCTGGAATAAGAGATAAAGATACTATTACTTCTAATTTTCAAGCATGGAGTAATGGTGGAGGA
AAAAGAATAGAAGGACTCTATAGGCGTAGAACCAAAGAAGCAGATATGTTTTTAAATGCAGATTATACAGGTAATTTATA
A

Upstream 100 bases:

>100_bases
GCATTTTATTTTAGTAAAGATAGAAAAGAAATTAAAGAGTAATTTAGGTAGCGATTATAGCTACCTTTTTTCTTTATATT
AATAGAAGGAGGAATAAGTA

Downstream 100 bases:

>100_bases
AAATAAGGAATATAAAAATAGATTAATTCATATATTTATGATATATACATTTCAATCTCCATGTAGGCAAAGCTTACAAT
TTATCGCTAATTTATATCCT

Product: phage lysozyme

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Surface Protein PspC; Lysozyme; Surface Protein PspA; Phage-Related Lysozyme; Phage Lysozyme; Collagenolytic Protease; Pneumococcal Surface Protein A; Integrin-Like Repeat-Containing Lysozyme; Gifsy-2 Prophage Lysozyme; Protective Antigen SpaA-Like Protein; Glycoside Hydrolase Family 3 Protein; Dipeptidase; Surface Protein A

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSQWKWCVEDSTGNITKGWYEDNSKWYYLKDNGTMATGWIEDKDGRWYYLDESGAMKTGWLKSPYSSKWFYLNPVSNGYM
GAMYTEGTYIIEGNEYKFDKEGAWIEDNYLVSDSCIDFIKLWEGFPEEGRKYYDMVGVLTQGYGMTGKEIENLPDQISEY
EATKLLKEWINKKYAPVIKKDLDSKGICLKQNEFDSLVSFAYNCGTSGLLGSTLYRNIVAGIRDKDTITSNFQAWSNGGG
KRIEGLYRRRTKEADMFLNADYTGNL

Sequences:

>Translated_266_residues
MSQWKWCVEDSTGNITKGWYEDNSKWYYLKDNGTMATGWIEDKDGRWYYLDESGAMKTGWLKSPYSSKWFYLNPVSNGYM
GAMYTEGTYIIEGNEYKFDKEGAWIEDNYLVSDSCIDFIKLWEGFPEEGRKYYDMVGVLTQGYGMTGKEIENLPDQISEY
EATKLLKEWINKKYAPVIKKDLDSKGICLKQNEFDSLVSFAYNCGTSGLLGSTLYRNIVAGIRDKDTITSNFQAWSNGGG
KRIEGLYRRRTKEADMFLNADYTGNL
>Mature_265_residues
SQWKWCVEDSTGNITKGWYEDNSKWYYLKDNGTMATGWIEDKDGRWYYLDESGAMKTGWLKSPYSSKWFYLNPVSNGYMG
AMYTEGTYIIEGNEYKFDKEGAWIEDNYLVSDSCIDFIKLWEGFPEEGRKYYDMVGVLTQGYGMTGKEIENLPDQISEYE
ATKLLKEWINKKYAPVIKKDLDSKGICLKQNEFDSLVSFAYNCGTSGLLGSTLYRNIVAGIRDKDTITSNFQAWSNGGGK
RIEGLYRRRTKEADMFLNADYTGNL

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 30684; Mature: 30552

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWKWCVEDSTGNITKGWYEDNSKWYYLKDNGTMATGWIEDKDGRWYYLDESGAMKTGW
CCCCCEEEECCCCCEEECEEECCCEEEEEECCCEEEEEEEECCCCCEEEECCCCCEECCC
LKSPYSSKWFYLNPVSNGYMGAMYTEGTYIIEGNEYKFDKEGAWIEDNYLVSDSCIDFIK
CCCCCCCCCEEECCCCCCCEEEEEECCEEEEECCCEEECCCCCEEECCEEECHHHHHHHH
LWEGFPEEGRKYYDMVGVLTQGYGMTGKEIENLPDQISEYEATKLLKEWINKKYAPVIKK
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DLDSKGICLKQNEFDSLVSFAYNCGTSGLLGSTLYRNIVAGIRDKDTITSNFQAWSNGGG
CCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCC
KRIEGLYRRRTKEADMFLNADYTGNL
HHHHHHHHHHCCCCCEEEECCCCCCC
>Mature Secondary Structure 
SQWKWCVEDSTGNITKGWYEDNSKWYYLKDNGTMATGWIEDKDGRWYYLDESGAMKTGW
CCCCEEEECCCCCEEECEEECCCEEEEEECCCEEEEEEEECCCCCEEEECCCCCEECCC
LKSPYSSKWFYLNPVSNGYMGAMYTEGTYIIEGNEYKFDKEGAWIEDNYLVSDSCIDFIK
CCCCCCCCCEEECCCCCCCEEEEEECCEEEEECCCEEECCCCCEEECCEEECHHHHHHHH
LWEGFPEEGRKYYDMVGVLTQGYGMTGKEIENLPDQISEYEATKLLKEWINKKYAPVIKK
HHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DLDSKGICLKQNEFDSLVSFAYNCGTSGLLGSTLYRNIVAGIRDKDTITSNFQAWSNGGG
CCCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHCCCHHHCCCCC
KRIEGLYRRRTKEADMFLNADYTGNL
HHHHHHHHHHCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA