| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934577
Identifier: 187934577
GI number: 187934577
Start: 1973407
End: 1973871
Strand: Reverse
Name: 187934577
Synonym: CLL_A1872
Alternate gene names: NA
Gene position: 1973871-1973407 (Counterclockwise)
Preceding gene: 187934029
Following gene: 187935236
Centisome position: 51.94
GC content: 24.3
Gene sequence:
>465_bases ATGAGAGGAAAACATGCAATTGGAAATAGACCATTTGGTAATATACATTTAGATTATATTAGATATAAAGATAGTGATAA AGATGTTAGACAAATGTATGAAAGGGTAAAGAATGATTACTTAAAAAATGAAAATTTGGACATAGATTTAGAAAAAGCAT ATTTAAATGAGAGATTTATATCCTATAAAGGAGACATAGGAAAAGATTACTTTAATGTACTTATGATATCTTTAGCTGCT TTCTTAGGAGGAATTTCCACACAATATTTTAATAGGCCAATTATGACATTGGCTATATTGCTTGCATTTATTATTATAGT AGTAAAGTCTTTTTCAAATATACATACAAAAGTAATGCTTAATAAAGAGAAATATGAACATAAGTATTATATTATATGTA TTGAAGCTTTAAAAGAAATTGAGCATGAACAAAATAGTATAATAGAAGTAAAAAATCTAAATTAG
Upstream 100 bases:
>100_bases AGATGTATTTATAGAAATTAATTTTCTATGTTTACCTCTTTATTTTTTTGCAAAAATAATACATAATATAGTAAAAGTGT TATATATAGGAGATGATAAG
Downstream 100 bases:
>100_bases AATAAAGAAATTATTTTAGAATATTAATTAAGTTTTAAATAACAAATGGATTCAAATAATTTGAATCCATTCTTTGTATG ATTTTATTTATGCCTGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MRGKHAIGNRPFGNIHLDYIRYKDSDKDVRQMYERVKNDYLKNENLDIDLEKAYLNERFISYKGDIGKDYFNVLMISLAA FLGGISTQYFNRPIMTLAILLAFIIIVVKSFSNIHTKVMLNKEKYEHKYYIICIEALKEIEHEQNSIIEVKNLN
Sequences:
>Translated_154_residues MRGKHAIGNRPFGNIHLDYIRYKDSDKDVRQMYERVKNDYLKNENLDIDLEKAYLNERFISYKGDIGKDYFNVLMISLAA FLGGISTQYFNRPIMTLAILLAFIIIVVKSFSNIHTKVMLNKEKYEHKYYIICIEALKEIEHEQNSIIEVKNLN >Mature_154_residues MRGKHAIGNRPFGNIHLDYIRYKDSDKDVRQMYERVKNDYLKNENLDIDLEKAYLNERFISYKGDIGKDYFNVLMISLAA FLGGISTQYFNRPIMTLAILLAFIIIVVKSFSNIHTKVMLNKEKYEHKYYIICIEALKEIEHEQNSIIEVKNLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18173; Mature: 18173
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGKHAIGNRPFGNIHLDYIRYKDSDKDVRQMYERVKNDYLKNENLDIDLEKAYLNERFI CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH SYKGDIGKDYFNVLMISLAAFLGGISTQYFNRPIMTLAILLAFIIIVVKSFSNIHTKVML HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE NKEKYEHKYYIICIEALKEIEHEQNSIIEVKNLN CHHHHCCEEEEEEHHHHHHHHHHCCCEEEEECCC >Mature Secondary Structure MRGKHAIGNRPFGNIHLDYIRYKDSDKDVRQMYERVKNDYLKNENLDIDLEKAYLNERFI CCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH SYKGDIGKDYFNVLMISLAAFLGGISTQYFNRPIMTLAILLAFIIIVVKSFSNIHTKVML HCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE NKEKYEHKYYIICIEALKEIEHEQNSIIEVKNLN CHHHHCCEEEEEEHHHHHHHHHHCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA