| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934527
Identifier: 187934527
GI number: 187934527
Start: 2736319
End: 2737374
Strand: Reverse
Name: 187934527
Synonym: CLL_A2629
Alternate gene names: NA
Gene position: 2737374-2736319 (Counterclockwise)
Preceding gene: 187933582
Following gene: 187935518
Centisome position: 72.03
GC content: 31.25
Gene sequence:
>1056_bases ATGGCAAGAGAGGCAGAACATAACTTTTATTCGGAGGCATATCAGAGGAATGAGAAGGAAAGAGGAAATTGGCACCGTGA AGTAGTTGAGGCTGTAATTAATAGCAGTACAGATAAAAATATTGATATTAATGGCAGAAAATTTGGGACTACACAAAAAG TAAATGATTTTAAGAAGATGTTAAAATTTCTCAATAATTATGAATTGAATAGTAGTAATGATATTATTACTAATAACATA ATTAAAAGGTTTCTTGAAGCGGAACAGGAACAACCGGTTAAGGAAATTGTATCACGGGCATGGATCGGACTATGGGATTC AACAGAAAGTATAAATGCTTGTGTAAATAAAAAAGATTTTTATGACGATAGTTATTTGATTAGATTTACAACAGAATTAC AGATTTTGATTCGCAAAGTTGCAGAATTATATTGTACAGCAATACTATTTGATATGATGAAACCTGCAAAGGGTAAAGTT TTGGAATTCTTGAACAACATGATAGGGATTCAATTGCATGATATACAGCATGATAATGATGAGATTGGAGTATTTGATTA TATCGATATTCTACCGGATGGTTTTAGAAATGTTTATGAAATCATTTTTTATAATGTATTTTCTGCTTCGTGTGCTTTTG TAATTTTTCATGAAATTGGGCATAAGATTGAAGTTGAAAACGAAATTGCTGTATTATATGATGTCAACTCCTCAATATTA TTTGAAGATGGGCATCAAAGACAGATTCAATGTGAATTTAATGCTGATGATATCAGCATGAAAATAATAGAAAGTCTTTA TGGCAAAGAAGAGGTGAGTGATTGGCTTGGATATGCTGGGATTTTGGTATGCTTCATGACTCTTGCTATTAACACACACA GTTTATTGAAAGAAACAGATCATCCATCTATAAAAAGCAGGTATATGCGTGCAGTAAATTTCATAAAAGAGCGAATAGAT GAAACGTCATTTAATAAATTATTAAGTAGAATTGATATATTAGGTAGATTTTTAGCTATAGTAACTGAATGGGAAGATAA GTCCTGGTGGAAGTAA
Upstream 100 bases:
>100_bases CGGTAACTTCAAATTATTCATATATCAATTAGGCAAATAAAATGAAGAGTTTTTAGTTTTGAGAAAAGTATGTAAAAAGA ATTAATTTTTTGGAGGAATT
Downstream 100 bases:
>100_bases CTACAACAATTCATTTTTTAAAATTCGGATTTGTATTTATGAATAATTTTAATGACACAAGTGTAAATGGTGTAAAGATA TTTATTGCAAAGAAAACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MAREAEHNFYSEAYQRNEKERGNWHREVVEAVINSSTDKNIDINGRKFGTTQKVNDFKKMLKFLNNYELNSSNDIITNNI IKRFLEAEQEQPVKEIVSRAWIGLWDSTESINACVNKKDFYDDSYLIRFTTELQILIRKVAELYCTAILFDMMKPAKGKV LEFLNNMIGIQLHDIQHDNDEIGVFDYIDILPDGFRNVYEIIFYNVFSASCAFVIFHEIGHKIEVENEIAVLYDVNSSIL FEDGHQRQIQCEFNADDISMKIIESLYGKEEVSDWLGYAGILVCFMTLAINTHSLLKETDHPSIKSRYMRAVNFIKERID ETSFNKLLSRIDILGRFLAIVTEWEDKSWWK
Sequences:
>Translated_351_residues MAREAEHNFYSEAYQRNEKERGNWHREVVEAVINSSTDKNIDINGRKFGTTQKVNDFKKMLKFLNNYELNSSNDIITNNI IKRFLEAEQEQPVKEIVSRAWIGLWDSTESINACVNKKDFYDDSYLIRFTTELQILIRKVAELYCTAILFDMMKPAKGKV LEFLNNMIGIQLHDIQHDNDEIGVFDYIDILPDGFRNVYEIIFYNVFSASCAFVIFHEIGHKIEVENEIAVLYDVNSSIL FEDGHQRQIQCEFNADDISMKIIESLYGKEEVSDWLGYAGILVCFMTLAINTHSLLKETDHPSIKSRYMRAVNFIKERID ETSFNKLLSRIDILGRFLAIVTEWEDKSWWK >Mature_350_residues AREAEHNFYSEAYQRNEKERGNWHREVVEAVINSSTDKNIDINGRKFGTTQKVNDFKKMLKFLNNYELNSSNDIITNNII KRFLEAEQEQPVKEIVSRAWIGLWDSTESINACVNKKDFYDDSYLIRFTTELQILIRKVAELYCTAILFDMMKPAKGKVL EFLNNMIGIQLHDIQHDNDEIGVFDYIDILPDGFRNVYEIIFYNVFSASCAFVIFHEIGHKIEVENEIAVLYDVNSSILF EDGHQRQIQCEFNADDISMKIIESLYGKEEVSDWLGYAGILVCFMTLAINTHSLLKETDHPSIKSRYMRAVNFIKERIDE TSFNKLLSRIDILGRFLAIVTEWEDKSWWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41085; Mature: 40954
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAREAEHNFYSEAYQRNEKERGNWHREVVEAVINSSTDKNIDINGRKFGTTQKVNDFKKM CCCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LKFLNNYELNSSNDIITNNIIKRFLEAEQEQPVKEIVSRAWIGLWDSTESINACVNKKDF HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC YDDSYLIRFTTELQILIRKVAELYCTAILFDMMKPAKGKVLEFLNNMIGIQLHDIQHDND CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEECCCCCC EIGVFDYIDILPDGFRNVYEIIFYNVFSASCAFVIFHEIGHKIEVENEIAVLYDVNSSIL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE FEDGHQRQIQCEFNADDISMKIIESLYGKEEVSDWLGYAGILVCFMTLAINTHSLLKETD EECCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HPSIKSRYMRAVNFIKERIDETSFNKLLSRIDILGRFLAIVTEWEDKSWWK CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AREAEHNFYSEAYQRNEKERGNWHREVVEAVINSSTDKNIDINGRKFGTTQKVNDFKKM CCCHHHHHHHHHHHCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH LKFLNNYELNSSNDIITNNIIKRFLEAEQEQPVKEIVSRAWIGLWDSTESINACVNKKDF HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCC YDDSYLIRFTTELQILIRKVAELYCTAILFDMMKPAKGKVLEFLNNMIGIQLHDIQHDND CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCEEEEECCCCCC EIGVFDYIDILPDGFRNVYEIIFYNVFSASCAFVIFHEIGHKIEVENEIAVLYDVNSSIL CCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEECCCCEE FEDGHQRQIQCEFNADDISMKIIESLYGKEEVSDWLGYAGILVCFMTLAINTHSLLKETD EECCCCEEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HPSIKSRYMRAVNFIKERIDETSFNKLLSRIDILGRFLAIVTEWEDKSWWK CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA