| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934386
Identifier: 187934386
GI number: 187934386
Start: 2827136
End: 2827786
Strand: Reverse
Name: 187934386
Synonym: CLL_A2717
Alternate gene names: NA
Gene position: 2827786-2827136 (Counterclockwise)
Preceding gene: 187934539
Following gene: 187935010
Centisome position: 74.41
GC content: 27.5
Gene sequence:
>651_bases ATGCAAGTAATTAATTCTAAAAAAGGATTACAAATGTATAATTCAGTTTCTCCTATATACGATAAAAATATAATTATGCA AGCGATTTTTGAAGCGATAGGAAGTGAAGCTGATTTAACAGAAAAACAGTTAGATGATATAATGCTACAAATTTATCCAC AAACTGCTACTTGGGGACTTGTATTTTGGGAAGAAAGATATAAATTACAAACAAATTTAGATGAGCCTATAGAAATTAGA CGAGCTAAAGTAATTAGTAGAATCCAAACTAAAAATAAAATAGTAAATCCTAAGAGAATTGAGCTTACGATAAAAAACTT TATTAAAGCACAAGTAGAAGTTTTAGACAGTATTGCTCCATATATATTAGGAATAAATATAACAAGCGAAAAGGGATTTC ATAATAGTTTAAATTCTATGTATAAAGAAGTTAAAAGAATTAAACCTTCACATATGGGAGTTAAATATAATTTAATATCT AGAACTAAGAGCAATTTGTATATAGGTGCTGCATGTATTACTGGACATAAGATAACAATTTATCCGTGGAAAACTAAAAA ATTAACAAGTAAAGGTAAAATAAGTATGGCTGGACCAATTATAAGGAGTTCTCAACATATTACTATTTATCCTAAGCAAG AAAAGGAGTGA
Upstream 100 bases:
>100_bases CAAGATGAAGGAATAGACGATTATGCTAATTTAACAATAAATAAGTCTACTACCAATATACAATTAGTTGATCAAATTGC AGCTATAGGAGATGTGATAA
Downstream 100 bases:
>100_bases TGAATTTGGATATATATACGTTAGTTACTAACATAGGAAAGGCTAAAATAGCAAATGCAACTGTAACTGGTTCAAAAGTA GATTTTTTAAAATTAAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MQVINSKKGLQMYNSVSPIYDKNIIMQAIFEAIGSEADLTEKQLDDIMLQIYPQTATWGLVFWEERYKLQTNLDEPIEIR RAKVISRIQTKNKIVNPKRIELTIKNFIKAQVEVLDSIAPYILGINITSEKGFHNSLNSMYKEVKRIKPSHMGVKYNLIS RTKSNLYIGAACITGHKITIYPWKTKKLTSKGKISMAGPIIRSSQHITIYPKQEKE
Sequences:
>Translated_216_residues MQVINSKKGLQMYNSVSPIYDKNIIMQAIFEAIGSEADLTEKQLDDIMLQIYPQTATWGLVFWEERYKLQTNLDEPIEIR RAKVISRIQTKNKIVNPKRIELTIKNFIKAQVEVLDSIAPYILGINITSEKGFHNSLNSMYKEVKRIKPSHMGVKYNLIS RTKSNLYIGAACITGHKITIYPWKTKKLTSKGKISMAGPIIRSSQHITIYPKQEKE >Mature_216_residues MQVINSKKGLQMYNSVSPIYDKNIIMQAIFEAIGSEADLTEKQLDDIMLQIYPQTATWGLVFWEERYKLQTNLDEPIEIR RAKVISRIQTKNKIVNPKRIELTIKNFIKAQVEVLDSIAPYILGINITSEKGFHNSLNSMYKEVKRIKPSHMGVKYNLIS RTKSNLYIGAACITGHKITIYPWKTKKLTSKGKISMAGPIIRSSQHITIYPKQEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24816; Mature: 24816
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVINSKKGLQMYNSVSPIYDKNIIMQAIFEAIGSEADLTEKQLDDIMLQIYPQTATWGL CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCEEEE VFWEERYKLQTNLDEPIEIRRAKVISRIQTKNKIVNPKRIELTIKNFIKAQVEVLDSIAP EEEECHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC YILGINITSEKGFHNSLNSMYKEVKRIKPSHMGVKYNLISRTKSNLYIGAACITGHKITI EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEEE YPWKTKKLTSKGKISMAGPIIRSSQHITIYPKQEKE EECCCCCCCCCCCEEECCCEEECCCEEEEECCCCCC >Mature Secondary Structure MQVINSKKGLQMYNSVSPIYDKNIIMQAIFEAIGSEADLTEKQLDDIMLQIYPQTATWGL CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHEEEEECCCCEEEE VFWEERYKLQTNLDEPIEIRRAKVISRIQTKNKIVNPKRIELTIKNFIKAQVEVLDSIAP EEEECHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCC YILGINITSEKGFHNSLNSMYKEVKRIKPSHMGVKYNLISRTKSNLYIGAACITGHKITI EEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCEEEE YPWKTKKLTSKGKISMAGPIIRSSQHITIYPKQEKE EECCCCCCCCCCCEEECCCEEECCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA