BacMap

Definition	Clostridium botulinum B str. Eklund 17B, complete genome.
Accession	NC_010674
Length	3,800,327

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The map label for this gene is tagH [H]

Identifier: 187934373

GI number: 187934373

Start: 3401651

End: 3402871

Strand: Reverse

Name: tagH [H]

Synonym: CLL_A3247

Alternate gene names: 187934373

Gene position: 3402871-3401651 (Counterclockwise)

Preceding gene: 255987641

Following gene: 187935357

Centisome position: 89.54

GC content: 28.5

Gene sequence:

>1221_bases
ATGTCAGATATAGCTATAAAAATAGAAAATTTAAGTAAACTATATAAATTATATGATAAGCCTCTAGATAGAATGAAAGA
AGCTTTAAGTATATCAAAAAAGAAATATAGCAGAGAACATTATGCGTTAAAAAATATATCATTTGAAGTTAAAAGGGGTG
AAACATTAGGCATACTAGGGACAAATGGATCTGGTAAATCTACATTATTAAAAATAATTACAGGTGTATTAACTCCTTCT
TCAGGAATGGTTCAAGTTAATGGAAAGATATCAGCATTATTAGAGCTTGGAGCAGGATTTAATCCAGAGTATACAGGATT
AGAAAATATATATCTTAACGGAACAATGATGGGGTATACAAGAGAACAAATGGAACAAAGATTAGGTTCAATAATTGAGT
TTGCTGATATAGGTGAATTTATAAATCAGCCAGTAAAAACTTATTCAAGTGGTATGTTTGCAAGATTGGCATTTGCTGTT
GCTATAAATGTTGAACCGGAAATACTTATAGTAGATGAAGCTTTATCTGTAGGAGATGTGAGATTTCAAACTAAATGCAT
CAACAAAATGAAAGAACTTAAAGAGAATGGAACTACTATTTTATTTGTTTCTCATGCAACAGAACAAGTAAAAAGATTTT
GTACTAAAGCAATATGGATAAACAAAGGTGAAATTATTGATAGTGGAGAATCAAGTGAAATAGTAGATAAATATGAAGCT
TTTATGTTACAAGGTGGGAAAATAAAAGAAGATATAGTTGAAGAAGTTATCATAGAAAAAGAACAAATAAAAGAAAAAAA
TCTTATTAGACCTTCAGAGGATATAGTTGCAATTATAACAAAAGTTACTTGCTCTAAATCTAATATTGAAACTTTTGATA
AGATAGAAGTTATTGTTGAATATGAGATATATGATAATGAAATATCAGGATTTTTATTAGGTGTTGCATTGTACACGCCA
GATAGAGATTACATATTTGGGCCTAATACACATCTAGATAAGATTAAAGTACTGAATACATATGGAAGACATAAGGTGAA
ATATGTTATACCATCCGTGAGTTTATTAGGGGGAAGTTATAATATAGATGTAGGTATATTTAATAATGAAGGAATAGTGT
GTATAGACTATAAGTCGGATGTATGCAACTTTTTAATAACCAATAAATACTTTTCAGAAGGTCAATTTTTTATGGAACAT
AAATGGGAGGTAATTAAATAA

Upstream 100 bases:

>100_bases
TTTTGGGTTATAATTTTAGGATTATTTATTTTAGGAACAGTTATATTTAAGAAACTTAAACCACATTTTGCAGATGTATT
ATAGGTAAGGAGATATATAT

Downstream 100 bases:

>100_bases
TGGGAATTACTTTTGATCAATATCAAAGATATAAGACTATACAAATTATAGTTGAAGCTGTAAAGAAATATTATAATATT
GATAAATTAAATATTTTAGA

Product: O-antigen export system ATP-binding protein RfbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSDIAIKIENLSKLYKLYDKPLDRMKEALSISKKKYSREHYALKNISFEVKRGETLGILGTNGSGKSTLLKIITGVLTPS
SGMVQVNGKISALLELGAGFNPEYTGLENIYLNGTMMGYTREQMEQRLGSIIEFADIGEFINQPVKTYSSGMFARLAFAV
AINVEPEILIVDEALSVGDVRFQTKCINKMKELKENGTTILFVSHATEQVKRFCTKAIWINKGEIIDSGESSEIVDKYEA
FMLQGGKIKEDIVEEVIIEKEQIKEKNLIRPSEDIVAIITKVTCSKSNIETFDKIEVIVEYEIYDNEISGFLLGVALYTP
DRDYIFGPNTHLDKIKVLNTYGRHKVKYVIPSVSLLGGSYNIDVGIFNNEGIVCIDYKSDVCNFLITNKYFSEGQFFMEH
KWEVIK

Sequences:

>Translated_406_residues
MSDIAIKIENLSKLYKLYDKPLDRMKEALSISKKKYSREHYALKNISFEVKRGETLGILGTNGSGKSTLLKIITGVLTPS
SGMVQVNGKISALLELGAGFNPEYTGLENIYLNGTMMGYTREQMEQRLGSIIEFADIGEFINQPVKTYSSGMFARLAFAV
AINVEPEILIVDEALSVGDVRFQTKCINKMKELKENGTTILFVSHATEQVKRFCTKAIWINKGEIIDSGESSEIVDKYEA
FMLQGGKIKEDIVEEVIIEKEQIKEKNLIRPSEDIVAIITKVTCSKSNIETFDKIEVIVEYEIYDNEISGFLLGVALYTP
DRDYIFGPNTHLDKIKVLNTYGRHKVKYVIPSVSLLGGSYNIDVGIFNNEGIVCIDYKSDVCNFLITNKYFSEGQFFMEH
KWEVIK
>Mature_405_residues
SDIAIKIENLSKLYKLYDKPLDRMKEALSISKKKYSREHYALKNISFEVKRGETLGILGTNGSGKSTLLKIITGVLTPSS
GMVQVNGKISALLELGAGFNPEYTGLENIYLNGTMMGYTREQMEQRLGSIIEFADIGEFINQPVKTYSSGMFARLAFAVA
INVEPEILIVDEALSVGDVRFQTKCINKMKELKENGTTILFVSHATEQVKRFCTKAIWINKGEIIDSGESSEIVDKYEAF
MLQGGKIKEDIVEEVIIEKEQIKEKNLIRPSEDIVAIITKVTCSKSNIETFDKIEVIVEYEIYDNEISGFLLGVALYTPD
RDYIFGPNTHLDKIKVLNTYGRHKVKYVIPSVSLLGGSYNIDVGIFNNEGIVCIDYKSDVCNFLITNKYFSEGQFFMEHK
WEVIK

Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system [H]

COG id: COG1134

COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=228, Percent_Identity=27.1929824561404, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI153792144, Length=241, Percent_Identity=28.6307053941909, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI27881501, Length=193, Percent_Identity=26.9430051813472, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI30795238, Length=193, Percent_Identity=26.9430051813472, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI45446740, Length=229, Percent_Identity=27.0742358078603, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI47078218, Length=229, Percent_Identity=27.0742358078603, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI27262624, Length=275, Percent_Identity=26.5454545454545, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI27262626, Length=275, Percent_Identity=26.5454545454545, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI105990541, Length=193, Percent_Identity=27.4611398963731, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI27436953, Length=206, Percent_Identity=25.7281553398058, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI116734710, Length=232, Percent_Identity=25.8620689655172, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI6005701, Length=205, Percent_Identity=26.3414634146341, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27477115, Length=234, Percent_Identity=28.2051282051282, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI150417984, Length=192, Percent_Identity=26.0416666666667, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI89111135, Length=201, Percent_Identity=27.363184079602, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1789891, Length=249, Percent_Identity=26.1044176706827, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI1787758, Length=205, Percent_Identity=26.8292682926829, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1786319, Length=225, Percent_Identity=29.3333333333333, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=26.1261261261261, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=28.110599078341, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI48995001, Length=209, Percent_Identity=25.3588516746411, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI87081709, Length=204, Percent_Identity=26.4705882352941, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=25.8928571428571, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1789032, Length=258, Percent_Identity=24.8062015503876, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1788165, Length=212, Percent_Identity=27.8301886792453, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081782, Length=250, Percent_Identity=24.8, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=24.8826291079812, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1788210, Length=192, Percent_Identity=30.2083333333333, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI48994943, Length=216, Percent_Identity=26.3888888888889, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=24.1860465116279, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786253, Length=232, Percent_Identity=27.1551724137931, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=26.5486725663717, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1786703, Length=228, Percent_Identity=28.9473684210526, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=26.1904761904762, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790467, Length=202, Percent_Identity=25.2475247524752, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI87081834, Length=191, Percent_Identity=29.3193717277487, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1788225, Length=216, Percent_Identity=27.3148148148148, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790525, Length=214, Percent_Identity=25.7009345794392, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1787041, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1789962, Length=236, Percent_Identity=25.4237288135593, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1788897, Length=228, Percent_Identity=27.6315789473684, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI145693107, Length=252, Percent_Identity=24.2063492063492, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789672, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787712, Length=200, Percent_Identity=26.5, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1787112, Length=230, Percent_Identity=26.5217391304348, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1789593, Length=207, Percent_Identity=22.7053140096618, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790739, Length=211, Percent_Identity=22.2748815165877, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788450, Length=202, Percent_Identity=23.2673267326733, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565586, Length=208, Percent_Identity=28.3653846153846, Blast_Score=96, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI115533608, Length=222, Percent_Identity=25.6756756756757, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17510237, Length=271, Percent_Identity=24.3542435424354, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=206, Percent_Identity=24.2718446601942, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983510, Length=206, Percent_Identity=24.2718446601942, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71983523, Length=206, Percent_Identity=24.2718446601942, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=25.5707762557078, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17569081, Length=227, Percent_Identity=25.5506607929515, Blast_Score=65, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6321121, Length=217, Percent_Identity=27.6497695852535, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221500365, Length=193, Percent_Identity=26.4248704663212, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI116007184, Length=193, Percent_Identity=26.4248704663212, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI28573571, Length=295, Percent_Identity=22.0338983050847, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28573573, Length=295, Percent_Identity=22.0338983050847, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24643674, Length=230, Percent_Identity=23.0434782608696, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=23.5023041474654, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221512771, Length=217, Percent_Identity=24.8847926267281, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI85726357, Length=231, Percent_Identity=27.7056277056277, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI45550390, Length=226, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24650855, Length=247, Percent_Identity=25.1012145748988, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24650853, Length=247, Percent_Identity=25.1012145748988, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24648314, Length=215, Percent_Identity=24.6511627906977, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015860
- InterPro:   IPR003593
- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR001452 [H]

Pfam domain/function: PF00005 ABC_tran; PF08239 SH3_3 [H]

EC number: =3.6.3.40 [H]

Molecular weight: Translated: 45777; Mature: 45646

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIAIKIENLSKLYKLYDKPLDRMKEALSISKKKYSREHYALKNISFEVKRGETLGILG
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEE
TNGSGKSTLLKIITGVLTPSSGMVQVNGKISALLELGAGFNPEYTGLENIYLNGTMMGYT
CCCCCHHHHHHHHHHHCCCCCCEEEECCHHEEHHHHCCCCCCCCCCCCEEEECCEEECCH
REQMEQRLGSIIEFADIGEFINQPVKTYSSGMFARLAFAVAINVEPEILIVDEALSVGDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEECCCCEEEEECCCCCCCC
RFQTKCINKMKELKENGTTILFVSHATEQVKRFCTKAIWINKGEIIDSGESSEIVDKYEA
HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCEECCCCCHHHHHHHHH
FMLQGGKIKEDIVEEVIIEKEQIKEKNLIRPSEDIVAIITKVTCSKSNIETFDKIEVIVE
HHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEEEHHCCCCCCCCCCCEEEEEEE
YEIYDNEISGFLLGVALYTPDRDYIFGPNTHLDKIKVLNTYGRHKVKYVIPSVSLLGGSY
EEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCEEEEHHCCCEEEEEEECCCEEECCCE
NIDVGIFNNEGIVCIDYKSDVCNFLITNKYFSEGQFFMEHKWEVIK
EEEEEEECCCCEEEEECCCCHHHEEEECCCCCCCCEEEECCCEECC
>Mature Secondary Structure 
SDIAIKIENLSKLYKLYDKPLDRMKEALSISKKKYSREHYALKNISFEVKRGETLGILG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEE
TNGSGKSTLLKIITGVLTPSSGMVQVNGKISALLELGAGFNPEYTGLENIYLNGTMMGYT
CCCCCHHHHHHHHHHHCCCCCCEEEECCHHEEHHHHCCCCCCCCCCCCEEEECCEEECCH
REQMEQRLGSIIEFADIGEFINQPVKTYSSGMFARLAFAVAINVEPEILIVDEALSVGDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEEECCCCEEEEECCCCCCCC
RFQTKCINKMKELKENGTTILFVSHATEQVKRFCTKAIWINKGEIIDSGESSEIVDKYEA
HHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHEECCCCEECCCCCHHHHHHHHH
FMLQGGKIKEDIVEEVIIEKEQIKEKNLIRPSEDIVAIITKVTCSKSNIETFDKIEVIVE
HHHCCCCCHHHHHHHHHHCHHHHHHHCCCCCCHHHEEEEEHHCCCCCCCCCCCEEEEEEE
YEIYDNEISGFLLGVALYTPDRDYIFGPNTHLDKIKVLNTYGRHKVKYVIPSVSLLGGSY
EEEECCCCCCEEEEEEEECCCCCEEECCCCCCCCEEEEHHCCCEEEEEEECCCEEECCCE
NIDVGIFNNEGIVCIDYKSDVCNFLITNKYFSEGQFFMEHKWEVIK
EEEEEEECCCCEEEEECCCCHHHEEEECCCCCCCCEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA