| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934302
Identifier: 187934302
GI number: 187934302
Start: 2220112
End: 2220591
Strand: Reverse
Name: 187934302
Synonym: CLL_A2123
Alternate gene names: NA
Gene position: 2220591-2220112 (Counterclockwise)
Preceding gene: 187932885
Following gene: 187933520
Centisome position: 58.43
GC content: 29.58
Gene sequence:
>480_bases ATGAAATACCCAATAGATGTTAAGAATTTTCAAGATACTATCTATAATATTGTGGGGATTGATTCCATTGAAAGTGGAGT TTGTGACTTGGAAGGTGTAGATTCTGATTTAGTATTAACTTCAGATTATGCTCATTTGCCAATTGCAGCTCTTTTAAGAA CAAATGGTGGATTCGAAAGTGAACTATTAGTGCAATTTAGATTCACAATTGATAAGTCAGAAGAAGGTTTAGAAGCGTTA GAATTTATTTCTTGGTTTGTTAGAGATTATGCAAGAGATAAGACAAAAATACAATTAACACCATTTGCGTTGCCACCACA AACACCTAATGGAAGACAACTTGGAAGTACATTAAGATTTCATATAGATTTATTTGTAGAGAATGTTCATGATTCTTTAG ATCCAGTTTTAAAGGAAGTAAAGCAACTTAATAAAACATTAAGTATGGCAATAAAATTATATAAAATTAAAGTTAAATAA
Upstream 100 bases:
>100_bases TAGTAAAGTAGCATTAATACTTAGAAATATTAGTGCTACTTTTTATATTTATGCTATACTTATTTTATAAAAGTTATATG TTGGGAGGTGCCTTAAGTTT
Downstream 100 bases:
>100_bases TAAATTAGATAAGGAAGAAAGTAATGGAAAGAAAGATAAAGATGAGATATCCAATGTATCTTAAAGAATTTAAGTGCATA GGTGGAAGCTGTGAAGATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MKYPIDVKNFQDTIYNIVGIDSIESGVCDLEGVDSDLVLTSDYAHLPIAALLRTNGGFESELLVQFRFTIDKSEEGLEAL EFISWFVRDYARDKTKIQLTPFALPPQTPNGRQLGSTLRFHIDLFVENVHDSLDPVLKEVKQLNKTLSMAIKLYKIKVK
Sequences:
>Translated_159_residues MKYPIDVKNFQDTIYNIVGIDSIESGVCDLEGVDSDLVLTSDYAHLPIAALLRTNGGFESELLVQFRFTIDKSEEGLEAL EFISWFVRDYARDKTKIQLTPFALPPQTPNGRQLGSTLRFHIDLFVENVHDSLDPVLKEVKQLNKTLSMAIKLYKIKVK >Mature_159_residues MKYPIDVKNFQDTIYNIVGIDSIESGVCDLEGVDSDLVLTSDYAHLPIAALLRTNGGFESELLVQFRFTIDKSEEGLEAL EFISWFVRDYARDKTKIQLTPFALPPQTPNGRQLGSTLRFHIDLFVENVHDSLDPVLKEVKQLNKTLSMAIKLYKIKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18063; Mature: 18063
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPIDVKNFQDTIYNIVGIDSIESGVCDLEGVDSDLVLTSDYAHLPIAALLRTNGGFES CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCC ELLVQFRFTIDKSEEGLEALEFISWFVRDYARDKTKIQLTPFALPPQTPNGRQLGSTLRF EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECEECCCCCCCCHHHHHHHHH HIDLFVENVHDSLDPVLKEVKQLNKTLSMAIKLYKIKVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC >Mature Secondary Structure MKYPIDVKNFQDTIYNIVGIDSIESGVCDLEGVDSDLVLTSDYAHLPIAALLRTNGGFES CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCCC ELLVQFRFTIDKSEEGLEALEFISWFVRDYARDKTKIQLTPFALPPQTPNGRQLGSTLRF EEEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECEECCCCCCCCHHHHHHHHH HIDLFVENVHDSLDPVLKEVKQLNKTLSMAIKLYKIKVK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA