| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187934249
Identifier: 187934249
GI number: 187934249
Start: 2658731
End: 2660482
Strand: Reverse
Name: 187934249
Synonym: CLL_A2553
Alternate gene names: NA
Gene position: 2660482-2658731 (Counterclockwise)
Preceding gene: 187934518
Following gene: 187934730
Centisome position: 70.01
GC content: 28.08
Gene sequence:
>1752_bases ATGAAAAAAGAATTTTCAATGAGTAATGATAAAGTAATGATTAATTTTACTACAAAGTATTGTAATAATATTGATTCAGT ATTAGAAAGCGAAGGTTTTAGAAGGGTATTAACTAGTTATTTAGAAAAATCAAAAAGAAAAAATACATTAACATATAGAT TTTTAACAGATTCATTAGAGTCAAACGATACATCTAAGATTTGTAAAGCATTAATAAAAGCTATAAAATTTTTAACAATA ATGAGTGTAGAAGAAATTGTAGAATTGAGTCCAGGTTTTGAGATACTATTGACTAATAAAGATAGTTTTATTAGATTCGT AGAAGAGTTTTATTCTTACTGGAGAAGATTAGAAAGATATACTATAATTCATAGATATAAATTAAGAAAAGGCTTAGCAG CAATGAGTTTTACAGAAGCAAATGCAGAGTTTTCTGTAATCATACTTAAATTATATAGAAAAGTTGAAAAAAATGTATTG GGTTATCAACCTAAAGTTTATAGACAAATTCCAGCAGGTGGGAATGCATGTATTATGATTCATCAAATGGATTGGCCAAT TCCTAAAGGTTATGAGGAATTAGAAGAAATACCTTTTATAGATAATATTCTTTTAGAAACACCATTTATAACTTATCCAA AAAGAAATACGAGGGATGGAGTATTTTCAGAAATTAATGAGAATCCATTAAAATATACTAATATCAACAAAGAACATTGG TTTTGTTATCCAGCTAAAATAGGAGAATCATTAGCATATATATACTTCCATAGAGATTATATGGAACATGGAATAACTTT ATGCAACTTGTTTGAGATGGCTAGAACAGAAGAAATAAGAGGGAGAAGACCTGATATAGTATTTGTATTTGGAGCAAATG ACGAAAATGGAAAAGATTTAAAAACTGTATTTTATAATGATGATAAGAACGATATTATGCTTGGTTATATAAATCATTCG GATAAAATTGATTATTTTGGATATATGAAAAAAATGTCATTAACTCTTCATAATTTAAGAATGATTAAAAAGGGATATTT GCCAATACATGGGGCTATGGTAAATATTGTATTAAAGAATGGAAAAACAGCTAATGTAGTTATTATGGGAGATAGTGGAG CAGGAAAGTCAGAAAGTTTAGAGGCTTTTAGAAGCTTGAGTGAAGATTATATATCTGATATGACTATAATATTTGATGAC ATGGGAACTTTTAAATTAGAAGACGGTGAAATAAAGGGATATGGTACAGAAATAGGTGCATTTGTTAGATTGGATGATTT GGATCAAGGATATGCTTTTAAAGAAATGGATAGAAGTATATTTATGAACCCAGATAAAGTAAATGCTAGACTAGTTATGC CAGTTTCATCTTACAAAGAAATAATGGCAGGATATAATATCGATTTCTTCTTTTATGCAAACAATTATGAAGATGTAAAA GAAAATGAAAAACATCTAGAATATTTTACTTGTGCTGAGGAAGCTGTAAATGTATTTAGATCAGGTGCAAGAATGGCTAA GGGAACTACAACAGAAAAGGGATTAGTTGAATCATTTTTTGCAAATCCATTTGGTCCAGTTCAAAAACAAGAAGATACTA ATGTTCTTATAGAAGAATATTTTGACGTTATGTTTAAATCAAAGCAAACTAAAGTGGGTCAAATTAAAACATGCTTAGGT GTATGTGGAGAAGAGAAAAATGGACCTAAAAATGCAGCTTTAGAATTATTTGAAGAGATCAAAAAACTATAG
Upstream 100 bases:
>100_bases GAATATTGCAAAAACTATGTTATAATTAAATCAATATCAGCTTTTATAGAGAAAAATGCAATATTGGGTTATTAAAAAAT TCATAATAGGGGGCAAATAA
Downstream 100 bases:
>100_bases TTTGAAATTAAAATTAGTATATGCTTTTAAAATGAGTTGATATATTTAAATAGGTAAAGTGGCATTCAGTCCACTTTACT TATAAATATATCAATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKKEFSMSNDKVMINFTTKYCNNIDSVLESEGFRRVLTSYLEKSKRKNTLTYRFLTDSLESNDTSKICKALIKAIKFLTI MSVEEIVELSPGFEILLTNKDSFIRFVEEFYSYWRRLERYTIIHRYKLRKGLAAMSFTEANAEFSVIILKLYRKVEKNVL GYQPKVYRQIPAGGNACIMIHQMDWPIPKGYEELEEIPFIDNILLETPFITYPKRNTRDGVFSEINENPLKYTNINKEHW FCYPAKIGESLAYIYFHRDYMEHGITLCNLFEMARTEEIRGRRPDIVFVFGANDENGKDLKTVFYNDDKNDIMLGYINHS DKIDYFGYMKKMSLTLHNLRMIKKGYLPIHGAMVNIVLKNGKTANVVIMGDSGAGKSESLEAFRSLSEDYISDMTIIFDD MGTFKLEDGEIKGYGTEIGAFVRLDDLDQGYAFKEMDRSIFMNPDKVNARLVMPVSSYKEIMAGYNIDFFFYANNYEDVK ENEKHLEYFTCAEEAVNVFRSGARMAKGTTTEKGLVESFFANPFGPVQKQEDTNVLIEEYFDVMFKSKQTKVGQIKTCLG VCGEEKNGPKNAALELFEEIKKL
Sequences:
>Translated_583_residues MKKEFSMSNDKVMINFTTKYCNNIDSVLESEGFRRVLTSYLEKSKRKNTLTYRFLTDSLESNDTSKICKALIKAIKFLTI MSVEEIVELSPGFEILLTNKDSFIRFVEEFYSYWRRLERYTIIHRYKLRKGLAAMSFTEANAEFSVIILKLYRKVEKNVL GYQPKVYRQIPAGGNACIMIHQMDWPIPKGYEELEEIPFIDNILLETPFITYPKRNTRDGVFSEINENPLKYTNINKEHW FCYPAKIGESLAYIYFHRDYMEHGITLCNLFEMARTEEIRGRRPDIVFVFGANDENGKDLKTVFYNDDKNDIMLGYINHS DKIDYFGYMKKMSLTLHNLRMIKKGYLPIHGAMVNIVLKNGKTANVVIMGDSGAGKSESLEAFRSLSEDYISDMTIIFDD MGTFKLEDGEIKGYGTEIGAFVRLDDLDQGYAFKEMDRSIFMNPDKVNARLVMPVSSYKEIMAGYNIDFFFYANNYEDVK ENEKHLEYFTCAEEAVNVFRSGARMAKGTTTEKGLVESFFANPFGPVQKQEDTNVLIEEYFDVMFKSKQTKVGQIKTCLG VCGEEKNGPKNAALELFEEIKKL >Mature_583_residues MKKEFSMSNDKVMINFTTKYCNNIDSVLESEGFRRVLTSYLEKSKRKNTLTYRFLTDSLESNDTSKICKALIKAIKFLTI MSVEEIVELSPGFEILLTNKDSFIRFVEEFYSYWRRLERYTIIHRYKLRKGLAAMSFTEANAEFSVIILKLYRKVEKNVL GYQPKVYRQIPAGGNACIMIHQMDWPIPKGYEELEEIPFIDNILLETPFITYPKRNTRDGVFSEINENPLKYTNINKEHW FCYPAKIGESLAYIYFHRDYMEHGITLCNLFEMARTEEIRGRRPDIVFVFGANDENGKDLKTVFYNDDKNDIMLGYINHS DKIDYFGYMKKMSLTLHNLRMIKKGYLPIHGAMVNIVLKNGKTANVVIMGDSGAGKSESLEAFRSLSEDYISDMTIIFDD MGTFKLEDGEIKGYGTEIGAFVRLDDLDQGYAFKEMDRSIFMNPDKVNARLVMPVSSYKEIMAGYNIDFFFYANNYEDVK ENEKHLEYFTCAEEAVNVFRSGARMAKGTTTEKGLVESFFANPFGPVQKQEDTNVLIEEYFDVMFKSKQTKVGQIKTCLG VCGEEKNGPKNAALELFEEIKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67489; Mature: 67489
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKEFSMSNDKVMINFTTKYCNNIDSVLESEGFRRVLTSYLEKSKRKNTLTYRFLTDSLE CCCCCCCCCCEEEEEEEHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC SNDTSKICKALIKAIKFLTIMSVEEIVELSPGFEILLTNKDSFIRFVEEFYSYWRRLERY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH TIIHRYKLRKGLAAMSFTEANAEFSVIILKLYRKVEKNVLGYQPKVYRQIPAGGNACIMI HHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCEEEEE HQMDWPIPKGYEELEEIPFIDNILLETPFITYPKRNTRDGVFSEINENPLKYTNINKEHW EECCCCCCCCHHHHHHCCCHHHHHHCCCEEECCCCCCCCCHHHHCCCCCCEEECCCCCCE FCYPAKIGESLAYIYFHRDYMEHGITLCNLFEMARTEEIRGRRPDIVFVFGANDENGKDL EEEHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE KTVFYNDDKNDIMLGYINHSDKIDYFGYMKKMSLTLHNLRMIKKGYLPIHGAMVNIVLKN EEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEEC GKTANVVIMGDSGAGKSESLEAFRSLSEDYISDMTIIFDDMGTFKLEDGEIKGYGTEIGA CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCEEEECCCEEE FVRLDDLDQGYAFKEMDRSIFMNPDKVNARLVMPVSSYKEIMAGYNIDFFFYANNYEDVK EEEEECCCCCCCHHHHCHHHCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEEECCCHHHH ENEKHLEYFTCAEEAVNVFRSGARMAKGTTTEKGLVESFFANPFGPVQKQEDTNVLIEEY CCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH FDVMFKSKQTKVGQIKTCLGVCGEEKNGPKNAALELFEEIKKL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKKEFSMSNDKVMINFTTKYCNNIDSVLESEGFRRVLTSYLEKSKRKNTLTYRFLTDSLE CCCCCCCCCCEEEEEEEHHHHCCHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEEECCCC SNDTSKICKALIKAIKFLTIMSVEEIVELSPGFEILLTNKDSFIRFVEEFYSYWRRLERY CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH TIIHRYKLRKGLAAMSFTEANAEFSVIILKLYRKVEKNVLGYQPKVYRQIPAGGNACIMI HHHHHHHHHHCHHHEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCEEEEE HQMDWPIPKGYEELEEIPFIDNILLETPFITYPKRNTRDGVFSEINENPLKYTNINKEHW EECCCCCCCCHHHHHHCCCHHHHHHCCCEEECCCCCCCCCHHHHCCCCCCEEECCCCCCE FCYPAKIGESLAYIYFHRDYMEHGITLCNLFEMARTEEIRGRRPDIVFVFGANDENGKDL EEEHHHHCCCEEEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEE KTVFYNDDKNDIMLGYINHSDKIDYFGYMKKMSLTLHNLRMIKKGYLPIHGAMVNIVLKN EEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEEEEC GKTANVVIMGDSGAGKSESLEAFRSLSEDYISDMTIIFDDMGTFKLEDGEIKGYGTEIGA CCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCEEEECCCEEEECCCEEE FVRLDDLDQGYAFKEMDRSIFMNPDKVNARLVMPVSSYKEIMAGYNIDFFFYANNYEDVK EEEEECCCCCCCHHHHCHHHCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEEECCCHHHH ENEKHLEYFTCAEEAVNVFRSGARMAKGTTTEKGLVESFFANPFGPVQKQEDTNVLIEEY CCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH FDVMFKSKQTKVGQIKTCLGVCGEEKNGPKNAALELFEEIKKL HHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA